Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199812

Identifier: 87199812

GI number: 87199812

Start: 1893193

End: 1893585

Strand: Reverse

Name: 87199812

Synonym: Saro_1795

Alternate gene names: NA

Gene position: 1893585-1893193 (Counterclockwise)

Preceding gene: 87199813

Following gene: 87199806

Centisome position: 53.17

GC content: 66.41

Gene sequence:

>393_bases
ATGGCTTCGGGCACGACAGGTCGGCGGATCAGGGCATGGGCGCGGGACATCAAGCGTGATGTCGTCGCGTTGTGGCTGGC
CGCGCGGGACCCGCGCGTACCGGTCGCGGCGAAGATCGTTTCCGGGATCGTCGCGGCCTATGCCCTTTCGCCCATCGACC
TGATACCGGACTTCATTCCGGTGATCGGCTACCTCGACGACGTGATCCTCGTGCCACTGGGCATCCTGCTGGCGATCCGG
CTGATTCCTGCAGGGGTCATGGCGCAGTTGCGCGAGCAGGCGCTGAAGGTTGGACGGCCGCGATCGGCTGCAGGACTGGT
CGCCATCCTGCTTGTCTGGATCGCGGGCGTGACGGCACTGGGATGGTGGCTGTGGGGACGCATGCCCGGGTAA

Upstream 100 bases:

>100_bases
GCCGTGGTCAGTCTGCGCAAGAGCGTCGACGAGGCGGCGCGCTTCGTCGGGTTCGACTAGGCGCAGTTGCCTTTCCCCTC
CCCGGCCCCATCTGGAACTC

Downstream 100 bases:

>100_bases
CGCCGCACCCTGCAACGAAAAGGCCCCGCCTTTCGGCAGGGCCTTTCCTTGTCTCATTCAGGCTTGCGCGGTTCAGCGCA
GCGAGACGACGTTGTCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIPVIGYLDDVILVPLGILLAIR
LIPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTALGWWLWGRMPG

Sequences:

>Translated_130_residues
MASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIPVIGYLDDVILVPLGILLAIR
LIPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTALGWWLWGRMPG
>Mature_129_residues
ASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIPVIGYLDDVILVPLGILLAIRL
IPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTALGWWLWGRMPG

Specific function: Unknown

COG id: COG3339

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13980; Mature: 13849

Theoretical pI: Translated: 11.64; Mature: 11.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIP
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
VIGYLDDVILVPLGILLAIRLIPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GWWLWGRMPG
HHHHHHCCCC
>Mature Secondary Structure 
ASGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
VIGYLDDVILVPLGILLAIRLIPAGVMAQLREQALKVGRPRSAAGLVAILLVWIAGVTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GWWLWGRMPG
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA