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The map label for this gene is 87199790

Identifier: 87199790

GI number: 87199790

Start: 1870043

End: 1871179

Strand: Reverse

Name: 87199790

Synonym: Saro_1773

Alternate gene names: NA

Gene position: 1871179-1870043 (Counterclockwise)

Preceding gene: 87199793

Following gene: 87199780

Centisome position: 52.54

GC content: 63.06

Gene sequence:

>1137_bases
ATGGATCATTTGTGGACGCCGCGCCGCAAGCGACTTGCAATTTTGTTCTCTTTATGTTCGTTTCGCGCCATGGCCATTCA
CGGAAGAGGTGCGCAATTGGCGCGTGTCCCGGACAGGTTCGGGCTGGCTGCGCGCGAAGCCGATGGCGACTGGATGGACG
AGCGCGAGGGACTGGACGGCCCGGGACCCAAGCTGCGCACGACCGTAACGCTCGAACATCCGCGCTCGATCCTCACCTTC
AATCGTTCACCAGACATTCCGTTCGATCGATCGGTCAACGCCTATCGCGGCTGCGAACATGGCTGCATCTACTGCTACGC
CCGGCCCACGCACGCCTATCACGACCTTTCGCCGGGGCTGGATTTCGAAACGAAGCTCTTTGCCAAACCCGATGCGGCAA
GGCTTCTGCGCGAGACCTTGGCAAAGCCGGGGTACGCCCCTGCTCCTATAGCGATGGGCACGAACACCGACCCCTATCAG
CCCATCGAAGGCCGCTATCGCATCACCCGCGAGATCCTCCAGCTCTGCCTCGAACTGCGTCACCCGGTGACGATCACCAC
GAAATCCGCGCGCGTCATCGACGATCTCGATCTGCTGACCGAACTGGCGCGGCATCGACTGACCGCTGTCGGCATCTCGG
TCACCAGCCTCGATCCGCGCCTGTCCGGCCTGCTCGAACCCCGCGCGAGTTCGCCAGCCAAGCGACTGGACGCGCTGGAA
AAGCTTGTCGTCGCCGGTGTCCCTGCCCATGTCTCGGTCGCTCCTGTGATCCCGTCGATCACCGACGAATTCATGGAAGG
CATTCTGGCGGCGGCGGCGGAACGGGGCGTCCGCTCGGCAAGCTGGATCATGGTCCGCCTGCCCCACGAAGTCGCGCCGC
TTTTCCGCGAATGGCTGGACACGCACTTCCCCGACCGCGCGGGCAAGGTCATGTCCATCGTCCAGGCAGTGCGCGGCGGA
AAGGATTACGACGCGAAGTTCTTCACCCGGATGAAGCCCGAAGGCATCTGGGCCGACCTCATCCGCACCCGCTTCCGCGT
CGCCTGCCGCAAGTACGGCATCGGCAAGGCGGAGATCGACCTTGACTGCACGCAATTCAGAAAACCGAGCCGCAACGGGC
AGTTGGACCTTTTCTAG

Upstream 100 bases:

>100_bases
GACAGGGCCGATCCCGCAAAGACGATGGTTCCGATTCGAACCCGCATGGCCTTTCCATGCGCAACAGAACGCCGCGCGCC
AACCGGGTTAACCTCCAACT

Downstream 100 bases:

>100_bases
CCCTTGAACCGGATCAGGCGGCTATCGGCAACTGCTGCGGTGCGGTGTGGCAGGGCATCGCGGACATAGGCCTCGTCCTT
CACCATCGCGAAGAAGGCAC

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MDHLWTPRRKRLAILFSLCSFRAMAIHGRGAQLARVPDRFGLAAREADGDWMDEREGLDGPGPKLRTTVTLEHPRSILTF
NRSPDIPFDRSVNAYRGCEHGCIYCYARPTHAYHDLSPGLDFETKLFAKPDAARLLRETLAKPGYAPAPIAMGTNTDPYQ
PIEGRYRITREILQLCLELRHPVTITTKSARVIDDLDLLTELARHRLTAVGISVTSLDPRLSGLLEPRASSPAKRLDALE
KLVVAGVPAHVSVAPVIPSITDEFMEGILAAAAERGVRSASWIMVRLPHEVAPLFREWLDTHFPDRAGKVMSIVQAVRGG
KDYDAKFFTRMKPEGIWADLIRTRFRVACRKYGIGKAEIDLDCTQFRKPSRNGQLDLF

Sequences:

>Translated_378_residues
MDHLWTPRRKRLAILFSLCSFRAMAIHGRGAQLARVPDRFGLAAREADGDWMDEREGLDGPGPKLRTTVTLEHPRSILTF
NRSPDIPFDRSVNAYRGCEHGCIYCYARPTHAYHDLSPGLDFETKLFAKPDAARLLRETLAKPGYAPAPIAMGTNTDPYQ
PIEGRYRITREILQLCLELRHPVTITTKSARVIDDLDLLTELARHRLTAVGISVTSLDPRLSGLLEPRASSPAKRLDALE
KLVVAGVPAHVSVAPVIPSITDEFMEGILAAAAERGVRSASWIMVRLPHEVAPLFREWLDTHFPDRAGKVMSIVQAVRGG
KDYDAKFFTRMKPEGIWADLIRTRFRVACRKYGIGKAEIDLDCTQFRKPSRNGQLDLF
>Mature_378_residues
MDHLWTPRRKRLAILFSLCSFRAMAIHGRGAQLARVPDRFGLAAREADGDWMDEREGLDGPGPKLRTTVTLEHPRSILTF
NRSPDIPFDRSVNAYRGCEHGCIYCYARPTHAYHDLSPGLDFETKLFAKPDAARLLRETLAKPGYAPAPIAMGTNTDPYQ
PIEGRYRITREILQLCLELRHPVTITTKSARVIDDLDLLTELARHRLTAVGISVTSLDPRLSGLLEPRASSPAKRLDALE
KLVVAGVPAHVSVAPVIPSITDEFMEGILAAAAERGVRSASWIMVRLPHEVAPLFREWLDTHFPDRAGKVMSIVQAVRGG
KDYDAKFFTRMKPEGIWADLIRTRFRVACRKYGIGKAEIDLDCTQFRKPSRNGQLDLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42373; Mature: 42373

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHLWTPRRKRLAILFSLCSFRAMAIHGRGAQLARVPDRFGLAAREADGDWMDEREGLDG
CCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHCCCHHHCCEEECCCCCCCHHHCCCCC
PGPKLRTTVTLEHPRSILTFNRSPDIPFDRSVNAYRGCEHGCIYCYARPTHAYHDLSPGL
CCCCEEEEEEECCCCEEEEECCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCHHCCCCCC
DFETKLFAKPDAARLLRETLAKPGYAPAPIAMGTNTDPYQPIEGRYRITREILQLCLELR
CCCCEEECCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
HPVTITTKSARVIDDLDLLTELARHRLTAVGISVTSLDPRLSGLLEPRASSPAKRLDALE
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCHHHHHHHHH
KLVVAGVPAHVSVAPVIPSITDEFMEGILAAAAERGVRSASWIMVRLPHEVAPLFREWLD
HHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHH
THFPDRAGKVMSIVQAVRGGKDYDAKFFTRMKPEGIWADLIRTRFRVACRKYGIGKAEID
HCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC
LDCTQFRKPSRNGQLDLF
CCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDHLWTPRRKRLAILFSLCSFRAMAIHGRGAQLARVPDRFGLAAREADGDWMDEREGLDG
CCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHCCCHHHCCEEECCCCCCCHHHCCCCC
PGPKLRTTVTLEHPRSILTFNRSPDIPFDRSVNAYRGCEHGCIYCYARPTHAYHDLSPGL
CCCCEEEEEEECCCCEEEEECCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCHHCCCCCC
DFETKLFAKPDAARLLRETLAKPGYAPAPIAMGTNTDPYQPIEGRYRITREILQLCLELR
CCCCEEECCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
HPVTITTKSARVIDDLDLLTELARHRLTAVGISVTSLDPRLSGLLEPRASSPAKRLDALE
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCHHHHHHHHH
KLVVAGVPAHVSVAPVIPSITDEFMEGILAAAAERGVRSASWIMVRLPHEVAPLFREWLD
HHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHH
THFPDRAGKVMSIVQAVRGGKDYDAKFFTRMKPEGIWADLIRTRFRVACRKYGIGKAEID
HCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC
LDCTQFRKPSRNGQLDLF
CCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]