Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is iorA [H]
Identifier: 87199720
GI number: 87199720
Start: 1788834
End: 1789337
Strand: Reverse
Name: iorA [H]
Synonym: Saro_1703
Alternate gene names: 87199720
Gene position: 1789337-1788834 (Counterclockwise)
Preceding gene: 87199726
Following gene: 87199719
Centisome position: 50.24
GC content: 68.45
Gene sequence:
>504_bases ATGGGCGTCACCCTCACCATCAATGGCCGCAAACGCGTGGTCGAAGCCGAAGCGGACAAGCCCTTGCTGTGGGTTCTGCG GGAAGACCTCGACATGCCCGGAACCAAGTTCGGCTGCGGCGCCGGGCTGTGCGGTGCCTGCACCGTCCATCTCGATGGCG AGGCGATCCGCTCGTGCCAGACGCCGATTGCCGACGCGGCGGGCAAGGCCGTCACCACGATCGAGGGCGTCGGCGCAGAT CCGGTCGGAAAGCGCGTACAGAACGCCTGGATCGCGCTCGACGTGCCGCAGTGCGGATATTGCCAGGCTGGACAGATCAT GTCGGCCACCGCGCTCCTCCGCCAGACGCCCAAGCCCAGCGCCGAAGACATCGACGGCTGGATGAGCGGCAACATCTGCC GCTGCGCCACTTACCTGCGCATCCGCGCCGCCATCCGCCAGGCCGCCGGGCTCCCGGCCGAGATCGCCGATGCAGGCAAC GCCTTCGGGGAGGCCTCGGCATGA
Upstream 100 bases:
>100_bases GACCATGCCTTGATGCCTGTCCAGATTCAGACCATTGCGGGCTCGGGCATGGCACCTGCCAGGCCGGGCCCCAGCGAACA AAATCAAGGAAAAGAAGGCG
Downstream 100 bases:
>100_bases CCGTCGCCGCCGGCCTCTCCCGCCGCTCGTTCCTCGTCGCCTCGCTTGCCGGAGGCGCGGTCCTGACGCTCGACGCCTCG ATCGCGCTGGCGGCCCCGCA
Product: (2Fe-2S)-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MGVTLTINGRKRVVEAEADKPLLWVLREDLDMPGTKFGCGAGLCGACTVHLDGEAIRSCQTPIADAAGKAVTTIEGVGAD PVGKRVQNAWIALDVPQCGYCQAGQIMSATALLRQTPKPSAEDIDGWMSGNICRCATYLRIRAAIRQAAGLPAEIADAGN AFGEASA
Sequences:
>Translated_167_residues MGVTLTINGRKRVVEAEADKPLLWVLREDLDMPGTKFGCGAGLCGACTVHLDGEAIRSCQTPIADAAGKAVTTIEGVGAD PVGKRVQNAWIALDVPQCGYCQAGQIMSATALLRQTPKPSAEDIDGWMSGNICRCATYLRIRAAIRQAAGLPAEIADAGN AFGEASA >Mature_166_residues GVTLTINGRKRVVEAEADKPLLWVLREDLDMPGTKFGCGAGLCGACTVHLDGEAIRSCQTPIADAAGKAVTTIEGVGADP VGKRVQNAWIALDVPQCGYCQAGQIMSATALLRQTPKPSAEDIDGWMSGNICRCATYLRIRAAIRQAAGLPAEIADAGNA FGEASA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=160, Percent_Identity=40, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI71773480, Length=86, Percent_Identity=37.2093023255814, Blast_Score=67, Evalue=8e-12, Organism=Escherichia coli, GI1786480, Length=165, Percent_Identity=41.2121212121212, Blast_Score=119, Evalue=7e-29, Organism=Escherichia coli, GI1789232, Length=141, Percent_Identity=39.7163120567376, Blast_Score=83, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17540638, Length=154, Percent_Identity=39.6103896103896, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17539860, Length=156, Percent_Identity=35.2564102564103, Blast_Score=95, Evalue=2e-20, Organism=Caenorhabditis elegans, GI32566215, Length=156, Percent_Identity=33.974358974359, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI17737937, Length=153, Percent_Identity=40.5228758169935, Blast_Score=98, Evalue=3e-21, Organism=Drosophila melanogaster, GI24647193, Length=177, Percent_Identity=34.4632768361582, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24647201, Length=158, Percent_Identity=31.6455696202532, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24647199, Length=171, Percent_Identity=32.1637426900585, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24647197, Length=187, Percent_Identity=31.0160427807487, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647195, Length=187, Percent_Identity=31.0160427807487, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17373; Mature: 17242
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTLTINGRKRVVEAEADKPLLWVLREDLDMPGTKFGCGAGLCGACTVHLDGEAIRSCQ CCEEEEECCCEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHC TPIADAAGKAVTTIEGVGADPVGKRVQNAWIALDVPQCGYCQAGQIMSATALLRQTPKPS CCHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCC AEDIDGWMSGNICRCATYLRIRAAIRQAAGLPAEIADAGNAFGEASA HHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure GVTLTINGRKRVVEAEADKPLLWVLREDLDMPGTKFGCGAGLCGACTVHLDGEAIRSCQ CEEEEECCCEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHC TPIADAAGKAVTTIEGVGADPVGKRVQNAWIALDVPQCGYCQAGQIMSATALLRQTPKPS CCHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCC AEDIDGWMSGNICRCATYLRIRAAIRQAAGLPAEIADAGNAFGEASA HHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]