Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is iorB [H]

Identifier: 87199719

GI number: 87199719

Start: 1786675

End: 1788837

Strand: Reverse

Name: iorB [H]

Synonym: Saro_1702

Alternate gene names: 87199719

Gene position: 1788837-1786675 (Counterclockwise)

Preceding gene: 87199720

Following gene: 87199718

Centisome position: 50.23

GC content: 65.65

Gene sequence:

>2163_bases
ATGACCGTCGCCGCCGGCCTCTCCCGCCGCTCGTTCCTCGTCGCCTCGCTTGCCGGAGGCGCGGTCCTGACGCTCGACGC
CTCGATCGCGCTGGCGGCCCCGCAGGCGGAGATGGCGGCCGACGTGCTTAACGCATTCGTCCGGATCAATGCCGACAACA
CCGTCACCATTGGCGCCAAGAACCCCGAAATCGGCCAGGGCGTGAAGGTCATGCTGCCCATGCTCATCGCCGAGGAAATG
GACCTGGCGTGGGATCAGGTGAAGATCGAGCAGACCGACGCCGACGAGAAACGGTTCGGGCCACAGGTCGCTGGCGGAAG
CACCGCCACACCGCGCAACTGGCTGCCCATGCGCCAGGTCGGCGCGGCGGCTCGCCAGATGCTCGTCGCAGCCGCGGCGA
AGAAATGGGGCGTCGATCCGGCTGGCCTTTCGACCGCAAATGGCGCGGTGCTTCATGCGGCCAGCGGTCGCAGCGTGACT
TATGCGTCGCTGGCGAAGGACGCCGCAAGCCAGCCAGCGCCGGATCTCGCCAAGGTTGCACTCAAGGACCCGGCCAGGTT
CTCGATCATCGGCAAGTCGAAGCCCGGCGTCGACGTTCCCGCCATCGTGCGCGGACAACCGCTGTTCGGCATCGACACGC
GCCTTACGGGAATGCTCCACGCCGCCGTGGTCAAGTGCCCCGCGCACGGTGGCACGGTTGCCTCGTTCGACGATGCGGCG
GTCAAGGCGATCCCGGGCGTCGTTGCGGTTCTCGCCGTCAACAGCCGCCTCGTGCCCGAAGGCAGGCAGGATACCCTGCT
GATCGTGGCCGACAGTTGGTGGAAGGCCAGCCAGGCGCGCGAAAAGCTCGCGGTGAAATGGGACGACGCGGCGGTTTCGG
GCTTCTCGACCGCCGGGTACGAGGCGGCGGCGGCCAAGCTCATCGCCGCGCCCGCGCAGGTCAGCCTGTTCAAGGCCGGA
AATGCCGACACCGCGATTGCCGGTGCCGCAAAGGTCGTGAAGGCCGACTACGACTATCCCTTCCTCGCCCACGCCACGCT
GGAACCGCAGAACTGCACCGCGCTGTTCCAGGACGGCAAGCTCGAGATCTGGGCGCCCAGCCAGGCACCGGCCGGGGGCC
GCGCCGATACGGCAAAGTTCTGCGGCCTGTCGCCGGAAGACCTCACTATCCACCTCACCCGCATAGGCGGCGGTTTCGGC
CGGCGCCTGATGAACGACTACATGGTGATCGCAGGCCAGGCCGCAAAGGCGCTGCCCGGAAAGCCGGTGAAGGTCCTGTT
CGACCGCACGGATGACCTGCGCCACGATTTCTACCGTCCCGCCGGCTGGCACCGCTTTACTGCCGGTCTCGACGAAACGG
GCGCGCTGGTCGCACTCAAGGATCACTTCGTCACGTTCGGCAAGGATGGCAAGGCGATCCGCGCGGCGGACCTTGCGCCG
ACCGAGTTTCCCGGCCCCGTCCTGCCCAATGTCGATTTCGGGACAAGCTATCTCGAAACCAACCTCGCCACGGGCTGGCT
GCGCGCGCCGACCTCGAACGCTATGGCCTTCGTTTTCCAGTCCTTTCTCGACGAAGTAGCCGAAGCGGCGGGTCTCGATC
TTCCCGAACTCATGCGCCGCACGCTGGGCGAGCCTCGCGAAGTGCCGGGCGGTCGCGTACCGTTCCACACCGGCCGTGCC
CGGGGCGTGATCGACGCTGTTTGCAGGACCGCCGGCTGGAAAGGCCGGAAAAAGGGACGCGGCTTCGGTTTCTACTTTAG
CCACCTTGGCTACTTCGCTGAAGTAGTTGATCTTTCCATAGCCGATGGTGTTGTCAGGATCGACAAGGTCTGGGTCGCGG
GAGACGTCGGTTCGCAGATCATCAATCCGGTAAACGCACTCCACCAGGTGCAGGGTGCGACGATCGAAGGGATCGGCCAG
GCCTTGGTCAACCAGAAGATCGAGCAGGAAAATGGCGCCGTAACCGCCGGGAATTTTGGCGATTATTCCCCGATCCGGAT
CGATGCCGTGCCACGCGAGATCGCGGTGGAATGGGTGAAGACCGACTTCGCCCCGACAGGGCTCGGCGAACCGGCCCTTC
CCCCCGTGATCCCGGCCATCGCGAATGCCATCTATTCGATCACCGGAAAGCGTCATCGCCGTCTGCCGCTGGAGATGCTA
TAG

Upstream 100 bases:

>100_bases
GCTGCGCCACTTACCTGCGCATCCGCGCCGCCATCCGCCAGGCCGCCGGGCTCCCGGCCGAGATCGCCGATGCAGGCAAC
GCCTTCGGGGAGGCCTCGGC

Downstream 100 bases:

>100_bases
GCGCCCGCCATGGTCGCCACAACGCCACTCGATATCCTGCGCTTCATCGCTTCCCGAACCGCCGAGGGGCTGGAGTGCGT
GCTCGTCACGCTCGTCGGGA

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MTVAAGLSRRSFLVASLAGGAVLTLDASIALAAPQAEMAADVLNAFVRINADNTVTIGAKNPEIGQGVKVMLPMLIAEEM
DLAWDQVKIEQTDADEKRFGPQVAGGSTATPRNWLPMRQVGAAARQMLVAAAAKKWGVDPAGLSTANGAVLHAASGRSVT
YASLAKDAASQPAPDLAKVALKDPARFSIIGKSKPGVDVPAIVRGQPLFGIDTRLTGMLHAAVVKCPAHGGTVASFDDAA
VKAIPGVVAVLAVNSRLVPEGRQDTLLIVADSWWKASQAREKLAVKWDDAAVSGFSTAGYEAAAAKLIAAPAQVSLFKAG
NADTAIAGAAKVVKADYDYPFLAHATLEPQNCTALFQDGKLEIWAPSQAPAGGRADTAKFCGLSPEDLTIHLTRIGGGFG
RRLMNDYMVIAGQAAKALPGKPVKVLFDRTDDLRHDFYRPAGWHRFTAGLDETGALVALKDHFVTFGKDGKAIRAADLAP
TEFPGPVLPNVDFGTSYLETNLATGWLRAPTSNAMAFVFQSFLDEVAEAAGLDLPELMRRTLGEPREVPGGRVPFHTGRA
RGVIDAVCRTAGWKGRKKGRGFGFYFSHLGYFAEVVDLSIADGVVRIDKVWVAGDVGSQIINPVNALHQVQGATIEGIGQ
ALVNQKIEQENGAVTAGNFGDYSPIRIDAVPREIAVEWVKTDFAPTGLGEPALPPVIPAIANAIYSITGKRHRRLPLEML

Sequences:

>Translated_720_residues
MTVAAGLSRRSFLVASLAGGAVLTLDASIALAAPQAEMAADVLNAFVRINADNTVTIGAKNPEIGQGVKVMLPMLIAEEM
DLAWDQVKIEQTDADEKRFGPQVAGGSTATPRNWLPMRQVGAAARQMLVAAAAKKWGVDPAGLSTANGAVLHAASGRSVT
YASLAKDAASQPAPDLAKVALKDPARFSIIGKSKPGVDVPAIVRGQPLFGIDTRLTGMLHAAVVKCPAHGGTVASFDDAA
VKAIPGVVAVLAVNSRLVPEGRQDTLLIVADSWWKASQAREKLAVKWDDAAVSGFSTAGYEAAAAKLIAAPAQVSLFKAG
NADTAIAGAAKVVKADYDYPFLAHATLEPQNCTALFQDGKLEIWAPSQAPAGGRADTAKFCGLSPEDLTIHLTRIGGGFG
RRLMNDYMVIAGQAAKALPGKPVKVLFDRTDDLRHDFYRPAGWHRFTAGLDETGALVALKDHFVTFGKDGKAIRAADLAP
TEFPGPVLPNVDFGTSYLETNLATGWLRAPTSNAMAFVFQSFLDEVAEAAGLDLPELMRRTLGEPREVPGGRVPFHTGRA
RGVIDAVCRTAGWKGRKKGRGFGFYFSHLGYFAEVVDLSIADGVVRIDKVWVAGDVGSQIINPVNALHQVQGATIEGIGQ
ALVNQKIEQENGAVTAGNFGDYSPIRIDAVPREIAVEWVKTDFAPTGLGEPALPPVIPAIANAIYSITGKRHRRLPLEML
>Mature_719_residues
TVAAGLSRRSFLVASLAGGAVLTLDASIALAAPQAEMAADVLNAFVRINADNTVTIGAKNPEIGQGVKVMLPMLIAEEMD
LAWDQVKIEQTDADEKRFGPQVAGGSTATPRNWLPMRQVGAAARQMLVAAAAKKWGVDPAGLSTANGAVLHAASGRSVTY
ASLAKDAASQPAPDLAKVALKDPARFSIIGKSKPGVDVPAIVRGQPLFGIDTRLTGMLHAAVVKCPAHGGTVASFDDAAV
KAIPGVVAVLAVNSRLVPEGRQDTLLIVADSWWKASQAREKLAVKWDDAAVSGFSTAGYEAAAAKLIAAPAQVSLFKAGN
ADTAIAGAAKVVKADYDYPFLAHATLEPQNCTALFQDGKLEIWAPSQAPAGGRADTAKFCGLSPEDLTIHLTRIGGGFGR
RLMNDYMVIAGQAAKALPGKPVKVLFDRTDDLRHDFYRPAGWHRFTAGLDETGALVALKDHFVTFGKDGKAIRAADLAPT
EFPGPVLPNVDFGTSYLETNLATGWLRAPTSNAMAFVFQSFLDEVAEAAGLDLPELMRRTLGEPREVPGGRVPFHTGRAR
GVIDAVCRTAGWKGRKKGRGFGFYFSHLGYFAEVVDLSIADGVVRIDKVWVAGDVGSQIINPVNALHQVQGATIEGIGQA
LVNQKIEQENGAVTAGNFGDYSPIRIDAVPREIAVEWVKTDFAPTGLGEPALPPVIPAIANAIYSITGKRHRRLPLEML

Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789230, Length=401, Percent_Identity=22.1945137157107, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR012368
- InterPro:   IPR006311 [H]

Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.3.99.16 [H]

Molecular weight: Translated: 75974; Mature: 75842

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAAGLSRRSFLVASLAGGAVLTLDASIALAAPQAEMAADVLNAFVRINADNTVTIGAK
CCCCCCCCCHHEEEEEECCCEEEEEECEEEEECCHHHHHHHHHHHHEEECCCCEEEEECC
NPEIGQGVKVMLPMLIAEEMDLAWDQVKIEQTDADEKRFGPQVAGGSTATPRNWLPMRQV
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHH
GAAARQMLVAAAAKKWGVDPAGLSTANGAVLHAASGRSVTYASLAKDAASQPAPDLAKVA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCHHHHHH
LKDPARFSIIGKSKPGVDVPAIVRGQPLFGIDTRLTGMLHAAVVKCPAHGGTVASFDDAA
HCCCCEEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHH
VKAIPGVVAVLAVNSRLVPEGRQDTLLIVADSWWKASQAREKLAVKWDDAAVSGFSTAGY
HHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHEEEEECCHHHCCCCCCCH
EAAAAKLIAAPAQVSLFKAGNADTAIAGAAKVVKADYDYPFLAHATLEPQNCTALFQDGK
HHHHHHHHCCCCEEEEEECCCCCCHHHCCHHEEEECCCCCEEEEEEECCCCCEEEEECCE
LEIWAPSQAPAGGRADTAKFCGLSPEDLTIHLTRIGGGFGRRLMNDYMVIAGQAAKALPG
EEEEECCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCHHHHHHHHCEEEEECCHHHCCCC
KPVKVLFDRTDDLRHDFYRPAGWHRFTAGLDETGALVALKDHFVTFGKDGKAIRAADLAP
CCEEEEECCCHHHHHHHCCCCCCCEEECCCCCCCCEEEEECCEEEECCCCCEEEEECCCC
TEFPGPVLPNVDFGTSYLETNLATGWLRAPTSNAMAFVFQSFLDEVAEAAGLDLPELMRR
CCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TLGEPREVPGGRVPFHTGRARGVIDAVCRTAGWKGRKKGRGFGFYFSHLGYFAEVVDLSI
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ADGVVRIDKVWVAGDVGSQIINPVNALHQVQGATIEGIGQALVNQKIEQENGAVTAGNFG
HCCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCC
DYSPIRIDAVPREIAVEWVKTDFAPTGLGEPALPPVIPAIANAIYSITGKRHRRLPLEML
CCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHCC
>Mature Secondary Structure 
TVAAGLSRRSFLVASLAGGAVLTLDASIALAAPQAEMAADVLNAFVRINADNTVTIGAK
CCCCCCCCHHEEEEEECCCEEEEEECEEEEECCHHHHHHHHHHHHEEECCCCEEEEECC
NPEIGQGVKVMLPMLIAEEMDLAWDQVKIEQTDADEKRFGPQVAGGSTATPRNWLPMRQV
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHH
GAAARQMLVAAAAKKWGVDPAGLSTANGAVLHAASGRSVTYASLAKDAASQPAPDLAKVA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCHHHHHH
LKDPARFSIIGKSKPGVDVPAIVRGQPLFGIDTRLTGMLHAAVVKCPAHGGTVASFDDAA
HCCCCEEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHH
VKAIPGVVAVLAVNSRLVPEGRQDTLLIVADSWWKASQAREKLAVKWDDAAVSGFSTAGY
HHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHEEEEECCHHHCCCCCCCH
EAAAAKLIAAPAQVSLFKAGNADTAIAGAAKVVKADYDYPFLAHATLEPQNCTALFQDGK
HHHHHHHHCCCCEEEEEECCCCCCHHHCCHHEEEECCCCCEEEEEEECCCCCEEEEECCE
LEIWAPSQAPAGGRADTAKFCGLSPEDLTIHLTRIGGGFGRRLMNDYMVIAGQAAKALPG
EEEEECCCCCCCCCCCCHHHCCCCCCCEEEEEEECCCHHHHHHHHCEEEEECCHHHCCCC
KPVKVLFDRTDDLRHDFYRPAGWHRFTAGLDETGALVALKDHFVTFGKDGKAIRAADLAP
CCEEEEECCCHHHHHHHCCCCCCCEEECCCCCCCCEEEEECCEEEECCCCCEEEEECCCC
TEFPGPVLPNVDFGTSYLETNLATGWLRAPTSNAMAFVFQSFLDEVAEAAGLDLPELMRR
CCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TLGEPREVPGGRVPFHTGRARGVIDAVCRTAGWKGRKKGRGFGFYFSHLGYFAEVVDLSI
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ADGVVRIDKVWVAGDVGSQIINPVNALHQVQGATIEGIGQALVNQKIEQENGAVTAGNFG
HCCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCC
DYSPIRIDAVPREIAVEWVKTDFAPTGLGEPALPPVIPAIANAIYSITGKRHRRLPLEML
CCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7782304; 8157655 [H]