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The map label for this gene is scpB [H]

Identifier: 87199115

GI number: 87199115

Start: 1136291

End: 1136938

Strand: Direct

Name: scpB [H]

Synonym: Saro_1093

Alternate gene names: 87199115

Gene position: 1136291-1136938 (Clockwise)

Preceding gene: 87199114

Following gene: 87199116

Centisome position: 31.9

GC content: 66.51

Gene sequence:

>648_bases
GTGAGCGAGCCGAACGATCTTGAACGGGCGGTTGAAGCGACATTGTTCGCCGCCGAGCAACCCCTTACGGAACAAGAGAT
TTCTGCGCATCTGGGCGGCGTCGACCTGAAACGCACCTTACAGCACCTGAGCGACCTCTACGCCGACCGTGGCGTACATC
TGGTCGAGCGGGGAGGGCGCTGGCACTTCCAGACCGCACCCGACCTCGCCCACCTCCTGCGCCGTGAGAAGGAAGAGCCG
CGCCGCCTGTCGCGCGCCGCTACCGAAGCGCTCGCCATCATCGCCTACCACGAGCCCGTCAGCCGTGCCGAGATAGAAGC
GATTCGCGGCGTCCAGACCGCCAAGGGCACGCTGGACGTGCTGCTGGAAGCGGGCTGGATCCGCATCGCCGGTCGCCGCG
AGGTGCCGGGGCGGCCGACGATCTATGCGACGACACCCGATTTCCTCAGCCACTTCGGCCTCGAATCGCGTCGTGACCTG
CCTGGAATCGAGGAATTGCGGGCCGCAGGCTTGCTCGACCCGGTCGACGAGGCGTTTGCAGTCTTGACGGGCGGGCACGA
TGAGGACACGGGGGCGATCGAGTCCTCGGGCGGGGAGGACGATGACGCGGACGAGCGCGATGGCGTCGCAAACGACGACA
TCGCTTAG

Upstream 100 bases:

>100_bases
CGTCGAGTTTCCTTGCGGCGCTTGAACTGGCCAAGCAGGGGCGGGCGGAAATCGCGCAAGAACAGACGTTTGGGCCGCTC
ATGCTGCGTGCGGTGCGGCC

Downstream 100 bases:

>100_bases
TCGTGGCATGGATTGGCTGGCAAGTCGGGGCGGCAGTCCCTATCTAGGGTCGCGCGCCCGACGAGGCGCTAAGGAGTTAG
TCAAATGGGTGGTCTTTCCC

Product: condensin subunit ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSEPNDLERAVEATLFAAEQPLTEQEISAHLGGVDLKRTLQHLSDLYADRGVHLVERGGRWHFQTAPDLAHLLRREKEEP
RRLSRAATEALAIIAYHEPVSRAEIEAIRGVQTAKGTLDVLLEAGWIRIAGRREVPGRPTIYATTPDFLSHFGLESRRDL
PGIEELRAAGLLDPVDEAFAVLTGGHDEDTGAIESSGGEDDDADERDGVANDDIA

Sequences:

>Translated_215_residues
MSEPNDLERAVEATLFAAEQPLTEQEISAHLGGVDLKRTLQHLSDLYADRGVHLVERGGRWHFQTAPDLAHLLRREKEEP
RRLSRAATEALAIIAYHEPVSRAEIEAIRGVQTAKGTLDVLLEAGWIRIAGRREVPGRPTIYATTPDFLSHFGLESRRDL
PGIEELRAAGLLDPVDEAFAVLTGGHDEDTGAIESSGGEDDDADERDGVANDDIA
>Mature_214_residues
SEPNDLERAVEATLFAAEQPLTEQEISAHLGGVDLKRTLQHLSDLYADRGVHLVERGGRWHFQTAPDLAHLLRREKEEPR
RLSRAATEALAIIAYHEPVSRAEIEAIRGVQTAKGTLDVLLEAGWIRIAGRREVPGRPTIYATTPDFLSHFGLESRRDLP
GIEELRAAGLLDPVDEAFAVLTGGHDEDTGAIESSGGEDDDADERDGVANDDIA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 23529; Mature: 23398

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPNDLERAVEATLFAAEQPLTEQEISAHLGGVDLKRTLQHLSDLYADRGVHLVERGGR
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECCCCE
WHFQTAPDLAHLLRREKEEPRRLSRAATEALAIIAYHEPVSRAEIEAIRGVQTAKGTLDV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
LLEAGWIRIAGRREVPGRPTIYATTPDFLSHFGLESRRDLPGIEELRAAGLLDPVDEAFA
HHHCCEEEECCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHH
VLTGGHDEDTGAIESSGGEDDDADERDGVANDDIA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEPNDLERAVEATLFAAEQPLTEQEISAHLGGVDLKRTLQHLSDLYADRGVHLVERGGR
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECCCCE
WHFQTAPDLAHLLRREKEEPRRLSRAATEALAIIAYHEPVSRAEIEAIRGVQTAKGTLDV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH
LLEAGWIRIAGRREVPGRPTIYATTPDFLSHFGLESRRDLPGIEELRAAGLLDPVDEAFA
HHHCCEEEECCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHH
VLTGGHDEDTGAIESSGGEDDDADERDGVANDDIA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]