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The map label for this gene is scpA [H]

Identifier: 87199114

GI number: 87199114

Start: 1135497

End: 1136294

Strand: Direct

Name: scpA [H]

Synonym: Saro_1092

Alternate gene names: 87199114

Gene position: 1135497-1136294 (Clockwise)

Preceding gene: 87199113

Following gene: 87199115

Centisome position: 31.88

GC content: 66.42

Gene sequence:

>798_bases
ATGGACGAAGTCGCCGCACCGACGCTGTTCGAAGGCGACGAGGTGTGGGACGGCGTCGCCTCTGCCCAGGGCAACGACGC
GGCGCTCTATCTCGAGCTGGACGGGTGGGAAGGGCCGCTTGACCTCCTGCTCGAACTGGCGCGGCGGCAGAAGGTCGATC
TCCGGAAAATCTCGATCCTCGAACTGGTTGACCAGTATCTTGGCTATATCGAGCAGGCCGAGGCGCTGAAGCTTGAGCTT
GCCGCCGACTATCTGGTGATGGCGGCGTGGCTGGCCTATCTCAAGTCGCTCCTGCTGCTGCCCCGCGATCCCGAAGTGCA
GCCGAGCCCGGAGGAGCTGGCGCTGAAGCTGCAATTGCGGTTGCAGCGGCTTGGCGCGATGCGCGAGGCGGGGGCGCGGC
TGATGGCGCGCGACCGGGTGGGCCGCGACGTCTTCGTACGCGGTGCGCCCGAAGGCCTGCGGATTGACCGCAAGTCCTTG
TGGCAGTGTGATATCTTCTCGCTGATCCAGGCCTATGGCGCGATCAAGCACCGCAACCGCCCGGTCGTCCACATGGTGCG
CGAGCGGGCAGTGATGACGCTCGATGCCGCGCTCGCCCGGGTGTCGAAGATGCTCGGCGTGGTCATGGACTGGACCGACC
TGCGCGCCTTCCTGCCGCTTGAGGCCGACCCGATGTTGCGCAAGTCGGCGCTGGCGTCGAGTTTCCTTGCGGCGCTTGAA
CTGGCCAAGCAGGGGCGGGCGGAAATCGCGCAAGAACAGACGTTTGGGCCGCTCATGCTGCGTGCGGTGCGGCCGTGA

Upstream 100 bases:

>100_bases
AACGCGCGCTCGCGCCCACCGCGGCCTTCGACGCTCCAGCCGACATGACCGCTCAGGCCGCGCTTTTCGACAAGCGCGAC
CGGTTGCTGGAACTGGCCTG

Downstream 100 bases:

>100_bases
GCGAGCCGAACGATCTTGAACGGGCGGTTGAAGCGACATTGTTCGCCGCCGAGCAACCCCTTACGGAACAAGAGATTTCT
GCGCATCTGGGCGGCGTCGA

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MDEVAAPTLFEGDEVWDGVASAQGNDAALYLELDGWEGPLDLLLELARRQKVDLRKISILELVDQYLGYIEQAEALKLEL
AADYLVMAAWLAYLKSLLLLPRDPEVQPSPEELALKLQLRLQRLGAMREAGARLMARDRVGRDVFVRGAPEGLRIDRKSL
WQCDIFSLIQAYGAIKHRNRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPLEADPMLRKSALASSFLAALE
LAKQGRAEIAQEQTFGPLMLRAVRP

Sequences:

>Translated_265_residues
MDEVAAPTLFEGDEVWDGVASAQGNDAALYLELDGWEGPLDLLLELARRQKVDLRKISILELVDQYLGYIEQAEALKLEL
AADYLVMAAWLAYLKSLLLLPRDPEVQPSPEELALKLQLRLQRLGAMREAGARLMARDRVGRDVFVRGAPEGLRIDRKSL
WQCDIFSLIQAYGAIKHRNRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPLEADPMLRKSALASSFLAALE
LAKQGRAEIAQEQTFGPLMLRAVRP
>Mature_265_residues
MDEVAAPTLFEGDEVWDGVASAQGNDAALYLELDGWEGPLDLLLELARRQKVDLRKISILELVDQYLGYIEQAEALKLEL
AADYLVMAAWLAYLKSLLLLPRDPEVQPSPEELALKLQLRLQRLGAMREAGARLMARDRVGRDVFVRGAPEGLRIDRKSL
WQCDIFSLIQAYGAIKHRNRPVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPLEADPMLRKSALASSFLAALE
LAKQGRAEIAQEQTFGPLMLRAVRP

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29701; Mature: 29701

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVAAPTLFEGDEVWDGVASAQGNDAALYLELDGWEGPLDLLLELARRQKVDLRKISIL
CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH
ELVDQYLGYIEQAEALKLELAADYLVMAAWLAYLKSLLLLPRDPEVQPSPEELALKLQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LQRLGAMREAGARLMARDRVGRDVFVRGAPEGLRIDRKSLWQCDIFSLIQAYGAIKHRNR
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCC
PVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPLEADPMLRKSALASSFLAALE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LAKQGRAEIAQEQTFGPLMLRAVRP
HHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MDEVAAPTLFEGDEVWDGVASAQGNDAALYLELDGWEGPLDLLLELARRQKVDLRKISIL
CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH
ELVDQYLGYIEQAEALKLELAADYLVMAAWLAYLKSLLLLPRDPEVQPSPEELALKLQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LQRLGAMREAGARLMARDRVGRDVFVRGAPEGLRIDRKSLWQCDIFSLIQAYGAIKHRNR
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCC
PVVHMVRERAVMTLDAALARVSKMLGVVMDWTDLRAFLPLEADPMLRKSALASSFLAALE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LAKQGRAEIAQEQTFGPLMLRAVRP
HHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]