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The map label for this gene is ybhR [H]

Identifier: 87199059

GI number: 87199059

Start: 1075402

End: 1076550

Strand: Direct

Name: ybhR [H]

Synonym: Saro_1037

Alternate gene names: 87199059

Gene position: 1075402-1076550 (Clockwise)

Preceding gene: 87199058

Following gene: 87199064

Centisome position: 30.19

GC content: 65.97

Gene sequence:

>1149_bases
ATGAAGTGGCGGGCCGCTCTCGCGCGGATCGCCGCTATGGTGTTCAAGGAAGTGCGCCAGATGGTGCGCGACCCCGGCAC
GATCGGCATGATGCTGATGATGCCGATCGTGCAGCTCACGATCTTCGGCTTTGCGATAAACAACGATCCCCGCCGCCTCC
CAATGGCACTTGAGATCGGCGACAGCTCGCAGTTCGCGCGGAGCATCGACGCCGCGCTTCGCAACACCACCTACTTCCGC
GTGACGCACGTGGTGAGCGAGCCGGGCGAGGGCGAGCGGTTGCTGAAGGACGGGGCGGTGCAGTTCCTCGTGACCGTGCC
TGCCGACTTCGGCCGCGACCTGGTGCGCGGCGACCGGCCACAACTGCTGGTGACGGCGGACGCGACGGACCCGGCCTCGA
CCGGAAATGCCATCGGCGCGATCCAGCAGGCGGTCGATGGAGCGCTGGCGCAGGACCTGATCGGGCCGCTGGCCTTGCGC
GGGCAGGCCATCGGGCCGGGCGCCTCACCAGTCGATCTGGTGATCCATCGCAGCTACAATCCCGAAGGCATCACCAGCCA
CAATACCGTGCCCGGCCTGCTGGCCATCGTGCTGTCGATGACGATGGTCATGCTGACGGCGCTTTCGGTGACGCGCGAGG
TGGAGCAGGGCACGATGGAAAACCTGCTGGCGACGCCGCTGCGCCCGTTCGAGGTGATGGTGGGCAAGATCGTGCCCTAT
CTCGTGATCGGCGTGGTGCAGATGGCGGTGATCCTGCTGGCGGCGCAGGTGGTGTTCGATGTGCCGTTCGAAGGATCGGT
GACACTGACGCTGGGATCGACGCTGCTGTTCATGGTCACCAGCCTCGCGCTCGGCTTCATGCTCTCGACAATTGCCGCCA
GCCAGCTCCAGGCGATGCAGATGAGCTTCTTCTACATGCTGCCGTCGATCCTGCTGTCGGGCTTTGCCTTTCCGTTCAGG
GGAATGCCGGTTTGGGCGCAGTGGCTGGCCGAACTCCTGCCGACCACCCACTACATCAGGCTGGTGCGCGGCATCATGCT
AAAGGGCTGGACGCTGGGCGACGCCGCGTGGGAACTGGGCGTGCTGGCGGTGATGCTCGGCGTGCTGGGGACGGTGGCGG
TGCGGCGGTACCAGGACACGGTGGCCTAG

Upstream 100 bases:

>100_bases
CGGAGTTCGACACGGTGGCATGGCATGAGGCCCGGCCGAGCCTGGAGGACGTGTTCATCCACCTGATGCGCGGGGCCGAG
GACAATTCGGTGGTGGCGGC

Downstream 100 bases:

>100_bases
GTTCTGCCCCCCAGGGCCGCGGCGTCACTTTTCCGGCGCGGGCGCGCCGTCGGGCAGGACAAGTACCTGCACCGCCTTGT
CCGGCGAGAGGTAGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKWRAALARIAAMVFKEVRQMVRDPGTIGMMLMMPIVQLTIFGFAINNDPRRLPMALEIGDSSQFARSIDAALRNTTYFR
VTHVVSEPGEGERLLKDGAVQFLVTVPADFGRDLVRGDRPQLLVTADATDPASTGNAIGAIQQAVDGALAQDLIGPLALR
GQAIGPGASPVDLVIHRSYNPEGITSHNTVPGLLAIVLSMTMVMLTALSVTREVEQGTMENLLATPLRPFEVMVGKIVPY
LVIGVVQMAVILLAAQVVFDVPFEGSVTLTLGSTLLFMVTSLALGFMLSTIAASQLQAMQMSFFYMLPSILLSGFAFPFR
GMPVWAQWLAELLPTTHYIRLVRGIMLKGWTLGDAAWELGVLAVMLGVLGTVAVRRYQDTVA

Sequences:

>Translated_382_residues
MKWRAALARIAAMVFKEVRQMVRDPGTIGMMLMMPIVQLTIFGFAINNDPRRLPMALEIGDSSQFARSIDAALRNTTYFR
VTHVVSEPGEGERLLKDGAVQFLVTVPADFGRDLVRGDRPQLLVTADATDPASTGNAIGAIQQAVDGALAQDLIGPLALR
GQAIGPGASPVDLVIHRSYNPEGITSHNTVPGLLAIVLSMTMVMLTALSVTREVEQGTMENLLATPLRPFEVMVGKIVPY
LVIGVVQMAVILLAAQVVFDVPFEGSVTLTLGSTLLFMVTSLALGFMLSTIAASQLQAMQMSFFYMLPSILLSGFAFPFR
GMPVWAQWLAELLPTTHYIRLVRGIMLKGWTLGDAAWELGVLAVMLGVLGTVAVRRYQDTVA
>Mature_382_residues
MKWRAALARIAAMVFKEVRQMVRDPGTIGMMLMMPIVQLTIFGFAINNDPRRLPMALEIGDSSQFARSIDAALRNTTYFR
VTHVVSEPGEGERLLKDGAVQFLVTVPADFGRDLVRGDRPQLLVTADATDPASTGNAIGAIQQAVDGALAQDLIGPLALR
GQAIGPGASPVDLVIHRSYNPEGITSHNTVPGLLAIVLSMTMVMLTALSVTREVEQGTMENLLATPLRPFEVMVGKIVPY
LVIGVVQMAVILLAAQVVFDVPFEGSVTLTLGSTLLFMVTSLALGFMLSTIAASQLQAMQMSFFYMLPSILLSGFAFPFR
GMPVWAQWLAELLPTTHYIRLVRGIMLKGWTLGDAAWELGVLAVMLGVLGTVAVRRYQDTVA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=371, Percent_Identity=26.9541778975741, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787011, Length=351, Percent_Identity=28.4900284900285, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI48994943, Length=355, Percent_Identity=26.7605633802817, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI226510979, Length=345, Percent_Identity=29.5652173913043, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24650855, Length=391, Percent_Identity=21.4833759590793, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24650853, Length=391, Percent_Identity=21.7391304347826, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI85725260, Length=391, Percent_Identity=20.460358056266, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85725262, Length=391, Percent_Identity=20.460358056266, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41301; Mature: 41301

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWRAALARIAAMVFKEVRQMVRDPGTIGMMLMMPIVQLTIFGFAINNDPRRLPMALEIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEC
DSSQFARSIDAALRNTTYFRVTHVVSEPGEGERLLKDGAVQFLVTVPADFGRDLVRGDRP
CCHHHHHHHHHHHHCCHHEEEEEECCCCCCCHHHHHCCCEEEEEECCCHHCHHHHCCCCC
QLLVTADATDPASTGNAIGAIQQAVDGALAQDLIGPLALRGQAIGPGASPVDLVIHRSYN
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
PEGITSHNTVPGLLAIVLSMTMVMLTALSVTREVEQGTMENLLATPLRPFEVMVGKIVPY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVIGVVQMAVILLAAQVVFDVPFEGSVTLTLGSTLLFMVTSLALGFMLSTIAASQLQAMQ
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSFFYMLPSILLSGFAFPFRGMPVWAQWLAELLPTTHYIRLVRGIMLKGWTLGDAAWELG
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHH
VLAVMLGVLGTVAVRRYQDTVA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKWRAALARIAAMVFKEVRQMVRDPGTIGMMLMMPIVQLTIFGFAINNDPRRLPMALEIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEC
DSSQFARSIDAALRNTTYFRVTHVVSEPGEGERLLKDGAVQFLVTVPADFGRDLVRGDRP
CCHHHHHHHHHHHHCCHHEEEEEECCCCCCCHHHHHCCCEEEEEECCCHHCHHHHCCCCC
QLLVTADATDPASTGNAIGAIQQAVDGALAQDLIGPLALRGQAIGPGASPVDLVIHRSYN
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
PEGITSHNTVPGLLAIVLSMTMVMLTALSVTREVEQGTMENLLATPLRPFEVMVGKIVPY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVIGVVQMAVILLAAQVVFDVPFEGSVTLTLGSTLLFMVTSLALGFMLSTIAASQLQAMQ
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSFFYMLPSILLSGFAFPFRGMPVWAQWLAELLPTTHYIRLVRGIMLKGWTLGDAAWELG
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHH
VLAVMLGVLGTVAVRRYQDTVA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]