Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199064
Identifier: 87199064
GI number: 87199064
Start: 1081361
End: 1081786
Strand: Direct
Name: 87199064
Synonym: Saro_1042
Alternate gene names: NA
Gene position: 1081361-1081786 (Clockwise)
Preceding gene: 87199059
Following gene: 87199065
Centisome position: 30.36
GC content: 65.73
Gene sequence:
>426_bases ATGACCAGCCCCGCCGCCCGTACCGATGCGATCGCGCTGCTTGCCCGCTATTATGCCGCGTTCAACGCGGGCGACTGGCA GGGAATGCTGGACTGCCTCAGCGAGGACGTGGCGCACGACGTGAACCAGGGCGATCGCGTGGTCGGAAAGGCCGCGTTCG CCGAATTCCTGAAGCACATGGAGCGCTGCTACAAGGAGCGCCTGGAGGGCATCGTGCTGATGGCGAGCGAGGACGGCACC CGCGCTGCGGCGGAGTTCGTCGTCCATGGCGCATACCTGGCCACCGACGAAGGACTGCCAGAAGCGAGCGGGCAGAAATA TGTCCTGCCGGCCGGCGCGTTCATCGGCATTGAGGGCGGGAAGATCGCGCGCCTGACGATGTACTACAACCTTGCCGACT GGACCAGGCAGGTCGTGGGCGAGTGA
Upstream 100 bases:
>100_bases GGGCATCGCGATCCTTGCGGGGCGGCAAAGCTGCCTTTCCGGCGCATGGCTGGAACCGGCGCGCGAGGTTGGCTAGACCG GCTGCGAAGGAGATTTGCCC
Downstream 100 bases:
>100_bases GCATCACTGTCCGGCCACTGACCGGCGACGAGATCGCGGCGGCACTGGAAGACCTGGCGCGGCTGCGGATCGTCGTATTC GCGGCCTACCCTTACCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTSPAARTDAIALLARYYAAFNAGDWQGMLDCLSEDVAHDVNQGDRVVGKAAFAEFLKHMERCYKERLEGIVLMASEDGT RAAAEFVVHGAYLATDEGLPEASGQKYVLPAGAFIGIEGGKIARLTMYYNLADWTRQVVGE
Sequences:
>Translated_141_residues MTSPAARTDAIALLARYYAAFNAGDWQGMLDCLSEDVAHDVNQGDRVVGKAAFAEFLKHMERCYKERLEGIVLMASEDGT RAAAEFVVHGAYLATDEGLPEASGQKYVLPAGAFIGIEGGKIARLTMYYNLADWTRQVVGE >Mature_140_residues TSPAARTDAIALLARYYAAFNAGDWQGMLDCLSEDVAHDVNQGDRVVGKAAFAEFLKHMERCYKERLEGIVLMASEDGTR AAAEFVVHGAYLATDEGLPEASGQKYVLPAGAFIGIEGGKIARLTMYYNLADWTRQVVGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15338; Mature: 15207
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPAARTDAIALLARYYAAFNAGDWQGMLDCLSEDVAHDVNQGDRVVGKAAFAEFLKHM CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ERCYKERLEGIVLMASEDGTRAAAEFVVHGAYLATDEGLPEASGQKYVLPAGAFIGIEGG HHHHHHHHCEEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCEEEECCCC KIARLTMYYNLADWTRQVVGE CEEEEEEEECHHHHHHHHHCC >Mature Secondary Structure TSPAARTDAIALLARYYAAFNAGDWQGMLDCLSEDVAHDVNQGDRVVGKAAFAEFLKHM CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ERCYKERLEGIVLMASEDGTRAAAEFVVHGAYLATDEGLPEASGQKYVLPAGAFIGIEGG HHHHHHHHCEEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCEEEECCCC KIARLTMYYNLADWTRQVVGE CEEEEEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA