Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is hisA
Identifier: 87199031
GI number: 87199031
Start: 1051232
End: 1051957
Strand: Direct
Name: hisA
Synonym: Saro_1009
Alternate gene names: 87199031
Gene position: 1051232-1051957 (Clockwise)
Preceding gene: 87199030
Following gene: 87199032
Centisome position: 29.52
GC content: 65.01
Gene sequence:
>726_bases ATGATCGTCTTTCCCGCCATTGACCTGAAAGCTGGCCAGGTCGTTCGCCTCGCCGAAGGAGACATGGACCGCGCCACGGT CTACGGCGACAACCCGGCCCACCAGGCAAGCCTGTTCGCGCAGGCGGGGTCGCAATACCTCCACGTCGTCGATCTCGATG GCTCGTTCGCAGGGCGCGCTGAAAACCGCGAGGCGGTGGAAGGCATCCTCAAGTCCTTCCCCGGTCACGTTCAACTGGGC GGCGGCATCCGCACGCGCGAGGCCGTTTCGGGCTGGTTCGACCTCGGTGTCAGCCGCGTCGTCATGGGCACTGCCGCATT GAAGGACCCTCAGTTCGTCAAGGACATGGCGAAGGAATTCCCCGGCGGCATCGTCGTCGCAGTCGATGCGCGCGACGGCA TGGTCGCAACCGAGGGCTGGGCCGACGTTTCCGATGTCTCGGTCGTCGACCTCGCACGCCGCTTCGAGGATGCCGGCGTT GCCAGCCTGCTGTTCACCGACATCGGTCGTGACGGCCTGCTCAAGGGCGTGAATCTCGACGCGACGGTCGAACTCGCGCG CCGCGTCGACATTCCGGTGATCGCCAGCGGCGGCGTGAAGGGCATCGACGACATCCGCATGCTCAAGATCCACGAGGGCG ACGGAATTGAAGGTGTCATCACCGGCCGGGCGCTCTATGATGGACGTCTCGATCTGAAGGCCGCGATCGAGATGGCAGAG GCCTGA
Upstream 100 bases:
>100_bases TTCATCGTGGCCTCGGGCGAGGCCGATCTTGCCTGCCGCATCACCCATGTGCCGAAGGAAGCCTTCCGTTCCGCGTGATC GCCTGCTAGGCGCGCGGGCC
Downstream 100 bases:
>100_bases TTCCATGACTGTCCGCGTCCGCGTCATTCCCTGTCTCGACGTTGCCGATGGCCGCGTGGTCAAGGGCGTCAATTTCGTCG ACCTGCGCGATGCGGGAGAT
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIVFPAIDLKAGQVVRLAEGDMDRATVYGDNPAHQASLFAQAGSQYLHVVDLDGSFAGRAENREAVEGILKSFPGHVQLG GGIRTREAVSGWFDLGVSRVVMGTAALKDPQFVKDMAKEFPGGIVVAVDARDGMVATEGWADVSDVSVVDLARRFEDAGV ASLLFTDIGRDGLLKGVNLDATVELARRVDIPVIASGGVKGIDDIRMLKIHEGDGIEGVITGRALYDGRLDLKAAIEMAE A
Sequences:
>Translated_241_residues MIVFPAIDLKAGQVVRLAEGDMDRATVYGDNPAHQASLFAQAGSQYLHVVDLDGSFAGRAENREAVEGILKSFPGHVQLG GGIRTREAVSGWFDLGVSRVVMGTAALKDPQFVKDMAKEFPGGIVVAVDARDGMVATEGWADVSDVSVVDLARRFEDAGV ASLLFTDIGRDGLLKGVNLDATVELARRVDIPVIASGGVKGIDDIRMLKIHEGDGIEGVITGRALYDGRLDLKAAIEMAE A >Mature_241_residues MIVFPAIDLKAGQVVRLAEGDMDRATVYGDNPAHQASLFAQAGSQYLHVVDLDGSFAGRAENREAVEGILKSFPGHVQLG GGIRTREAVSGWFDLGVSRVVMGTAALKDPQFVKDMAKEFPGGIVVAVDARDGMVATEGWADVSDVSVVDLARRFEDAGV ASLLFTDIGRDGLLKGVNLDATVELARRVDIPVIASGGVKGIDDIRMLKIHEGDGIEGVITGRALYDGRLDLKAAIEMAE A
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=242, Percent_Identity=35.9504132231405, Blast_Score=134, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_NOVAD (Q2G9L9)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496288.1 - HSSP: P16250 - ProteinModelPortal: Q2G9L9 - SMR: Q2G9L9 - STRING: Q2G9L9 - GeneID: 3915791 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1009 - NMPDR: fig|48935.1.peg.3113 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - PhylomeDB: Q2G9L9 - ProtClustDB: PRK00748 - BioCyc: NARO279238:SARO_1009-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 25504; Mature: 25504
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVFPAIDLKAGQVVRLAEGDMDRATVYGDNPAHQASLFAQAGSQYLHVVDLDGSFAGRA CEEECEECCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC ENREAVEGILKSFPGHVQLGGGIRTREAVSGWFDLGVSRVVMGTAALKDPQFVKDMAKEF CCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC PGGIVVAVDARDGMVATEGWADVSDVSVVDLARRFEDAGVASLLFTDIGRDGLLKGVNLD CCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCC ATVELARRVDIPVIASGGVKGIDDIRMLKIHEGDGIEGVITGRALYDGRLDLKAAIEMAE HHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEECCEEECCCCCHHHHHHHHC A C >Mature Secondary Structure MIVFPAIDLKAGQVVRLAEGDMDRATVYGDNPAHQASLFAQAGSQYLHVVDLDGSFAGRA CEEECEECCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC ENREAVEGILKSFPGHVQLGGGIRTREAVSGWFDLGVSRVVMGTAALKDPQFVKDMAKEF CCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC PGGIVVAVDARDGMVATEGWADVSDVSVVDLARRFEDAGVASLLFTDIGRDGLLKGVNLD CCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCC ATVELARRVDIPVIASGGVKGIDDIRMLKIHEGDGIEGVITGRALYDGRLDLKAAIEMAE HHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEECCEEECCCCCHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA