The gene/protein map for NC_007794 is currently unavailable.
Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is yfeW [C]

Identifier: 87198983

GI number: 87198983

Start: 1007956

End: 1009251

Strand: Direct

Name: yfeW [C]

Synonym: Saro_0961

Alternate gene names: 87198983

Gene position: 1007956-1009251 (Clockwise)

Preceding gene: 87198982

Following gene: 87198984

Centisome position: 28.3

GC content: 69.14

Gene sequence:

>1296_bases
ATGCGGCAGATGGCGGTTTCAAGGCGCGGGCTGATCGGATCGCTGGGGGCGCTGGCCGGCTGTGCGCTGATGCCGCGACT
GGCGTGGGCGAGCGCGGCGGCCGAGGCCCGCTTTCCGGCGGTGGCGCGGATGGTCGACGGCTATGTCTCGTCCGGCAAGC
TGCCGGGCATGATCGCGGCGCTCGGCTGGGGCTCGAGCGAGGCGGCGATGGACATATCGCGCGGCGCGCTGGCCAAGGGC
GGCGCGGCGGCCGTGGACATGGACAGCCTGTTCCGCATCTATTCGATGACCAAGCCGATAACCGGCATGGCCGCGATGAT
GCTGGTGGACGAAGGGCGGTTGAGGCTCGACCAGCCGATAGCGGACCTGCTTCCCGCCTTCGCGAAGATGCAAGTGCAGG
CGGTGCCCGACGGTTCGATCTCCGACCTGAGGCCGGCGAAGACGCAGATCACCGTGCGGCACCTGCTGACGCACACGGCA
GGGCTGGGCTATTCGATCATCCAGAAGGGGCCGATCCGCGATGCCTACGTGAAAGCGGGGCTGGTGCCGGGACAGGCGAG
CCGGATGCCGCTTCCGGGGATGGACGCGCCGAAGCCGCTGGCCAGCCTTGCCGAGTTCGCGGACGTGCTGGCGACGATGC
CGCTGGTGTACGAGCCGGGGACGGTGTGGAGCTATTCGGTGGGGCTCGACCTGCTGGGGCGGGTGATCGAGGTGGCATCG
GGCAAGCCGTTCGATGCGTTCCTGGCGGAGCGGCTGTTCGAGCCTTGCGGCATGACTTCGACCTGGTTCCGTGTGCCCGC
GGCAGAGGCGGGGCGGCTGACGACCAATTATGGCGTCCTTGGCGGGCTGCTGCTGCCGATCGATCCGGGCCGGTCGTCGA
CCTATCTCGATGCTCCGCCCTATCCGTTCGGCGGAGCAGGGCTGGTGTCCTCTCCGCGCGACTACGACCGTTTCCTGGCG
ATGCTGCTGGGCTTCGGCCGGATAGACGGGCGCGAGGTGATGAGCGAGGCGGCTGTGCGGCTGGGGACGAGCAATCTCCT
GCCCGCAGGCACCGACCTCTCGCGCTCGTTCATCAAGGGCAACGGTTTCGGCGCGGGCGGCTCGGTCGGGCTGGGCGAGG
ATGCCGGGACGTTCGGCTGGGCCGGGGCGGCGGGGACCGTCGGCTTCGTAAGCTACCGGGCGGCGGTGCGGGCTGGCGTC
TATACCCAGTACATGCCGTCGGACGCCTATCCGGTGCACCAGGAATTCGCAAAGGCCGTGCTGGCCGATGTAACGGGAAG
GAAGGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
GGAGAATGGTGGCCAGTCGACGAGATCGAGGCCGCCGGATTGCCGACCGTTTTCGCCAAGGCGGCGCGGCTGGCGATTGC
CGAAAGGATTGGCTGACAAG

Downstream 100 bases:

>100_bases
TGGAAACGACGATTGCATTCGCAGGCGCAGGGCTCGACCGCGCCGACCACGTCCGCGCCGATGCCGGGAAGCTCGGCGAG
CTGATGAACTGGCGCGCCCG

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MRQMAVSRRGLIGSLGALAGCALMPRLAWASAAAEARFPAVARMVDGYVSSGKLPGMIAALGWGSSEAAMDISRGALAKG
GAAAVDMDSLFRIYSMTKPITGMAAMMLVDEGRLRLDQPIADLLPAFAKMQVQAVPDGSISDLRPAKTQITVRHLLTHTA
GLGYSIIQKGPIRDAYVKAGLVPGQASRMPLPGMDAPKPLASLAEFADVLATMPLVYEPGTVWSYSVGLDLLGRVIEVAS
GKPFDAFLAERLFEPCGMTSTWFRVPAAEAGRLTTNYGVLGGLLLPIDPGRSSTYLDAPPYPFGGAGLVSSPRDYDRFLA
MLLGFGRIDGREVMSEAAVRLGTSNLLPAGTDLSRSFIKGNGFGAGGSVGLGEDAGTFGWAGAAGTVGFVSYRAAVRAGV
YTQYMPSDAYPVHQEFAKAVLADVTGRKAAA

Sequences:

>Translated_431_residues
MRQMAVSRRGLIGSLGALAGCALMPRLAWASAAAEARFPAVARMVDGYVSSGKLPGMIAALGWGSSEAAMDISRGALAKG
GAAAVDMDSLFRIYSMTKPITGMAAMMLVDEGRLRLDQPIADLLPAFAKMQVQAVPDGSISDLRPAKTQITVRHLLTHTA
GLGYSIIQKGPIRDAYVKAGLVPGQASRMPLPGMDAPKPLASLAEFADVLATMPLVYEPGTVWSYSVGLDLLGRVIEVAS
GKPFDAFLAERLFEPCGMTSTWFRVPAAEAGRLTTNYGVLGGLLLPIDPGRSSTYLDAPPYPFGGAGLVSSPRDYDRFLA
MLLGFGRIDGREVMSEAAVRLGTSNLLPAGTDLSRSFIKGNGFGAGGSVGLGEDAGTFGWAGAAGTVGFVSYRAAVRAGV
YTQYMPSDAYPVHQEFAKAVLADVTGRKAAA
>Mature_431_residues
MRQMAVSRRGLIGSLGALAGCALMPRLAWASAAAEARFPAVARMVDGYVSSGKLPGMIAALGWGSSEAAMDISRGALAKG
GAAAVDMDSLFRIYSMTKPITGMAAMMLVDEGRLRLDQPIADLLPAFAKMQVQAVPDGSISDLRPAKTQITVRHLLTHTA
GLGYSIIQKGPIRDAYVKAGLVPGQASRMPLPGMDAPKPLASLAEFADVLATMPLVYEPGTVWSYSVGLDLLGRVIEVAS
GKPFDAFLAERLFEPCGMTSTWFRVPAAEAGRLTTNYGVLGGLLLPIDPGRSSTYLDAPPYPFGGAGLVSSPRDYDRFLA
MLLGFGRIDGREVMSEAAVRLGTSNLLPAGTDLSRSFIKGNGFGAGGSVGLGEDAGTFGWAGAAGTVGFVSYRAAVRAGV
YTQYMPSDAYPVHQEFAKAVLADVTGRKAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17550934, Length=274, Percent_Identity=30.6569343065693, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI115533026, Length=240, Percent_Identity=28.3333333333333, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 45021; Mature: 45021

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQMAVSRRGLIGSLGALAGCALMPRLAWASAAAEARFPAVARMVDGYVSSGKLPGMIAA
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
LGWGSSEAAMDISRGALAKGGAAAVDMDSLFRIYSMTKPITGMAAMMLVDEGRLRLDQPI
ECCCCCHHHHHHHCCCCCCCCCCEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCH
ADLLPAFAKMQVQAVPDGSISDLRPAKTQITVRHLLTHTAGLGYSIIQKGPIRDAYVKAG
HHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHC
LVPGQASRMPLPGMDAPKPLASLAEFADVLATMPLVYEPGTVWSYSVGLDLLGRVIEVAS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCEEEHHHHHHHHHHHHHHC
GKPFDAFLAERLFEPCGMTSTWFRVPAAEAGRLTTNYGVLGGLLLPIDPGRSSTYLDAPP
CCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEECCHHHCCEEEEECCCCCCCCCCCCC
YPFGGAGLVSSPRDYDRFLAMLLGFGRIDGREVMSEAAVRLGTSNLLPAGTDLSRSFIKG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC
NGFGAGGSVGLGEDAGTFGWAGAAGTVGFVSYRAAVRAGVYTQYMPSDAYPVHQEFAKAV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LADVTGRKAAA
HHHHCCCCCCC
>Mature Secondary Structure
MRQMAVSRRGLIGSLGALAGCALMPRLAWASAAAEARFPAVARMVDGYVSSGKLPGMIAA
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
LGWGSSEAAMDISRGALAKGGAAAVDMDSLFRIYSMTKPITGMAAMMLVDEGRLRLDQPI
ECCCCCHHHHHHHCCCCCCCCCCEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCH
ADLLPAFAKMQVQAVPDGSISDLRPAKTQITVRHLLTHTAGLGYSIIQKGPIRDAYVKAG
HHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHC
LVPGQASRMPLPGMDAPKPLASLAEFADVLATMPLVYEPGTVWSYSVGLDLLGRVIEVAS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCEEEHHHHHHHHHHHHHHC
GKPFDAFLAERLFEPCGMTSTWFRVPAAEAGRLTTNYGVLGGLLLPIDPGRSSTYLDAPP
CCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEECCHHHCCEEEEECCCCCCCCCCCCC
YPFGGAGLVSSPRDYDRFLAMLLGFGRIDGREVMSEAAVRLGTSNLLPAGTDLSRSFIKG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC
NGFGAGGSVGLGEDAGTFGWAGAAGTVGFVSYRAAVRAGVYTQYMPSDAYPVHQEFAKAV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LADVTGRKAAA
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]