Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198969
Identifier: 87198969
GI number: 87198969
Start: 994872
End: 995099
Strand: Direct
Name: 87198969
Synonym: Saro_0947
Alternate gene names: NA
Gene position: 994872-995099 (Clockwise)
Preceding gene: 87198968
Following gene: 87198973
Centisome position: 27.93
GC content: 62.28
Gene sequence:
>228_bases ATGGCCCGCGCTTGCGCAAACTTGGATGGCGGCATCCCTCAGCGCTACAAGAGTTTCATCTACCTTCCCGTGCGCTTCCT ACTGGCCTTGTGCGGAGGGGCCATCGCAACGGTCTTCGACGCAAAGACCGGGCTGGTGGCCTTTTACCTTGGCGCATCCG CTCCGGTGGTCATCGATAAGCTGGCTCAGGGCGCCCTGCCTACTCTTCCGCCCGACAGTCCGGGTTAG
Upstream 100 bases:
>100_bases TCCTATCGACGGGACGGGTGATCTGGAACTTCCCTATTTCGGCCAGTTGAGCATTTTCTGGACGGGCTTTCTCGGCAGCA TCGTTGTCGAAGTGGGCACG
Downstream 100 bases:
>100_bases ACCGCTACCCCTTCGTCCGCCTCGAATACGCGGATGTCGCGTTCGGTCAGGCCCAGCGCCGCACGTTCCTCGGCCCAGAC TTTCATGTGCTGCGTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MARACANLDGGIPQRYKSFIYLPVRFLLALCGGAIATVFDAKTGLVAFYLGASAPVVIDKLAQGALPTLPPDSPG
Sequences:
>Translated_75_residues MARACANLDGGIPQRYKSFIYLPVRFLLALCGGAIATVFDAKTGLVAFYLGASAPVVIDKLAQGALPTLPPDSPG >Mature_74_residues ARACANLDGGIPQRYKSFIYLPVRFLLALCGGAIATVFDAKTGLVAFYLGASAPVVIDKLAQGALPTLPPDSPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7751; Mature: 7620
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARACANLDGGIPQRYKSFIYLPVRFLLALCGGAIATVFDAKTGLVAFYLGASAPVVIDK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCHHHHH LAQGALPTLPPDSPG HHHCCCCCCCCCCCC >Mature Secondary Structure ARACANLDGGIPQRYKSFIYLPVRFLLALCGGAIATVFDAKTGLVAFYLGASAPVVIDK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCHHHHH LAQGALPTLPPDSPG HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA