Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198959
Identifier: 87198959
GI number: 87198959
Start: 984937
End: 985431
Strand: Direct
Name: 87198959
Synonym: Saro_0937
Alternate gene names: NA
Gene position: 984937-985431 (Clockwise)
Preceding gene: 87198957
Following gene: 87198960
Centisome position: 27.65
GC content: 71.31
Gene sequence:
>495_bases ATGATCAATCTCAAGAGCGCCGCCCTGGCCCTCGTCGCCGCCTCCACCGTCGCCACGGCTGTGCCGGCGACCGCCGCGGT GCTTCCGCAGGCCCACCAGTCGACCGCCGTCGCCACGCAGTGGAACGAAGGCTGGGACGGTGAGCGTTGGGAACACGGCC GCGACCGTGGCGACTGGCGCCGCGACCGCTACTACGGCGACCGCCACTATGGCGGCCGGGGCTATGACCGCGGCTACTAT CGCGGCAACGACCGCCGTTATTATGGCGAGCCTGTCTACCGCAATACCCGTGTCTGGCGCGGTGACGACGGCCGCTATTA CTGTCGCCGCTCGAACGGCACGACGGGCCTTCTGATCGGCGGTGCCGCCGGTGCGCTGCTCGGCCGCGAGGTCGCTGGCG ATTACGGTGACCGTACCCTCGGCGCGATCCTGGGCGCCGCCGGTGGCGCGCTGCTCGGCCGCGAGGTCGACCGTGGCGGC TCGCGCTGCCGCTAA
Upstream 100 bases:
>100_bases GCTCTCCGTTCAGGTTGGCGGGCGTAATCCTGAACCAACGAAAGATTCGGGACCCCAATTCGACAAGAACGAAGCGGTCT TCGAGATGAGGAGAAAGACC
Downstream 100 bases:
>100_bases GAGATACTGACCGTCCTTCGGGTCGCGCTGAAAGGTCGGCTGGGGAGCGCTCCGCACTTGCGGGGCGCTCCCTTTTCATT TGGGGCTGGGCGCTTTCTTA
Product: 17 kDa surface antigen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MINLKSAALALVAASTVATAVPATAAVLPQAHQSTAVATQWNEGWDGERWEHGRDRGDWRRDRYYGDRHYGGRGYDRGYY RGNDRRYYGEPVYRNTRVWRGDDGRYYCRRSNGTTGLLIGGAAGALLGREVAGDYGDRTLGAILGAAGGALLGREVDRGG SRCR
Sequences:
>Translated_164_residues MINLKSAALALVAASTVATAVPATAAVLPQAHQSTAVATQWNEGWDGERWEHGRDRGDWRRDRYYGDRHYGGRGYDRGYY RGNDRRYYGEPVYRNTRVWRGDDGRYYCRRSNGTTGLLIGGAAGALLGREVAGDYGDRTLGAILGAAGGALLGREVDRGG SRCR >Mature_164_residues MINLKSAALALVAASTVATAVPATAAVLPQAHQSTAVATQWNEGWDGERWEHGRDRGDWRRDRYYGDRHYGGRGYDRGYY RGNDRRYYGEPVYRNTRVWRGDDGRYYCRRSNGTTGLLIGGAAGALLGREVAGDYGDRTLGAILGAAGGALLGREVDRGG SRCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17960; Mature: 17960
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLKSAALALVAASTVATAVPATAAVLPQAHQSTAVATQWNEGWDGERWEHGRDRGDWR CCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCH RDRYYGDRHYGGRGYDRGYYRGNDRRYYGEPVYRNTRVWRGDDGRYYCRRSNGTTGLLIG HHHCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCEEEECCCCCEEEEECCCCEEEEEC GAAGALLGREVAGDYGDRTLGAILGAAGGALLGREVDRGGSRCR CCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MINLKSAALALVAASTVATAVPATAAVLPQAHQSTAVATQWNEGWDGERWEHGRDRGDWR CCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCH RDRYYGDRHYGGRGYDRGYYRGNDRRYYGEPVYRNTRVWRGDDGRYYCRRSNGTTGLLIG HHHCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCEEEECCCCCEEEEECCCCEEEEEC GAAGALLGREVAGDYGDRTLGAILGAAGGALLGREVDRGGSRCR CCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA