Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198960
Identifier: 87198960
GI number: 87198960
Start: 985557
End: 985784
Strand: Direct
Name: 87198960
Synonym: Saro_0938
Alternate gene names: NA
Gene position: 985557-985784 (Clockwise)
Preceding gene: 87198959
Following gene: 87198963
Centisome position: 27.67
GC content: 69.3
Gene sequence:
>228_bases ATGTACCGGCTACGGTTGATCGTCACGGCACTTGGCCTGGCCTTGTCAGGCTGCGGCTCTGCGCCCGCGGAGCCCGAGCA TCCGCCGCTCGACCCGGTCATGGCGGAAGCGCTTCAGGGCCAGTTGATGGTCGATCCCGACCTGACCCAGCAGAACCTGC GCAATCTTGCAATCATGCCCGGCGGCCCGGCCGATCCGGCCGCGCCCCTGCCGGACTCGCCGCGCTAG
Upstream 100 bases:
>100_bases CGCTGAAAGGTCGGCTGGGGAGCGCTCCGCACTTGCGGGGCGCTCCCTTTTCATTTGGGGCTGGGCGCTTTCTTAACCGG TCGCGGCTACGGATCGTGGC
Downstream 100 bases:
>100_bases TCGCTACGCAGGCCGACGCCGATGCTGGCGCGCGGCTGATCGACTTCGGTCGAGGCGACCGGATAGGCGCAATAGTCCGC CGCGTAATAGGCGCTGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MYRLRLIVTALGLALSGCGSAPAEPEHPPLDPVMAEALQGQLMVDPDLTQQNLRNLAIMPGGPADPAAPLPDSPR
Sequences:
>Translated_75_residues MYRLRLIVTALGLALSGCGSAPAEPEHPPLDPVMAEALQGQLMVDPDLTQQNLRNLAIMPGGPADPAAPLPDSPR >Mature_75_residues MYRLRLIVTALGLALSGCGSAPAEPEHPPLDPVMAEALQGQLMVDPDLTQQNLRNLAIMPGGPADPAAPLPDSPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7838; Mature: 7838
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLRLIVTALGLALSGCGSAPAEPEHPPLDPVMAEALQGQLMVDPDLTQQNLRNLAIMP CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCHHHHCEEECCC GGPADPAAPLPDSPR CCCCCCCCCCCCCCC >Mature Secondary Structure MYRLRLIVTALGLALSGCGSAPAEPEHPPLDPVMAEALQGQLMVDPDLTQQNLRNLAIMP CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCHHHHCEEECCC GGPADPAAPLPDSPR CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA