Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is fhuA [C]
Identifier: 87198888
GI number: 87198888
Start: 918006
End: 920645
Strand: Direct
Name: fhuA [C]
Synonym: Saro_0866
Alternate gene names: 87198888
Gene position: 918006-920645 (Clockwise)
Preceding gene: 87198885
Following gene: 87198896
Centisome position: 25.78
GC content: 64.73
Gene sequence:
>2640_bases ATGAAGTTTGCAGATACCATCCGCACGTCTGCCTCGCTCGCGGCCCTGGCGGTTGCCGCGCTTGCCGCGCCGGCTCTCGC GCAGGACAGCGCACAAGCCGATGGAGCCGCTGCGGCCGACAACCAGATTGTCGTGACCGGCGTGTTCAGCGCGAAATCGA TCGAAAATGCGCCGATCTCGATTTCGGCGGTGACTGCGGAAGAACTCTCGCAGCAGATCGCCAACAGCTCGGCCGACCTC ATCAGGAACGTCCCGGGCGTTTTCGTGAACTCCTCGCTGGGCGAGATCCGCAACGTCGTCTTCTCGCGCGGCGTTTCGGC CAACTCGCTCGATGGCGATGGCGGCTACTACTACGTCTCGATGCAGGAAGATGGCCTGCCGGTGGAACCGATCACCTCGG GCAACTTCGGTCCGGACTACTTCTCGCGCCCCGACATCATGCTCGACCGGCTCGAGGGCCTGCGCGGCGGCACCGCCACT GTCACCGGTAACAACGCGCCGGGCGGCATCTTCAACTACATCTCGCGGACCGGAAAGTCGCACCCCGGCTTCGAAGTCCA GGGCAAGCTCGGCCTCGAAGGCGACGGCAAGAACCCGTACTACCGCGTCGACGCCTATGCCGGCGGCGAAGTGGGCAATG GCCTCTATTATGCCATCGGCGGCTTCTACCGGAAGAGCGACGGCTCGCGCGATCCCGGCTATGCGCTGAACAAGGGCGGC CAGATCCGCGCCAATCTGCTGTGGGACTATGGCAACGGTTCGGTCCGCTTCGACGCCAAGTACCTCAATGACCACAACGG CTGGTTCGAGTTCACCCCGGCGTTCAACTACGACGATCCCAAGATCGCCGCCGGTTTCGACAACACTTCGTCGGTGCTGC CGCCGGCCAATGCCCACAGCTTCACCAACCCCGATGGATCGACCGGATCGTGGGATGCCTCGGACCTCGTCCACGCCCGC ACGCTTTCGTTCGGCATGACCTGGGACCACGAACTGGCTGACGGCATCAAGGTCCAGAATCGCGCGCGCTACAGCGAGAA CAAGACCGACTGGAGCACCGGCGGCCTGATCTTCCCGCTCGGCGTCGACGACTTCTTCCTGTCGATCCTGACCGGCACGC TCGGCCTGCCCGGCACCACCACCTACAAGGTGCGCGGCACGGACCAGGTCGCGGCCGAGGTCTTCTCGTTCTCGGGCTTC GACCACAGCGTGGTGACCAACAACCTGCCCAACCAGCACATCCTCGAGAACGGCGTGCTGTCGCAGGCCGCGCTTTCGAC CAAGTACCGTTCGCGCAGTTTCCAGGACCAGTTCACGCTTTCGGCCAGCCTCGGCGACCACTCGCTCGCCGCCGGCGCCT CGTTCGCGCACTCGCGCTACAGCCAGGCCAACGGCGCGGCGGGCATCGGCGTCTCGGCGCTCACGCCCACCCCGCAGGTC TATGACATCACCCACACCCTGCCCGACGGCACCGTGCTGCAGGTGACCGACCCGGCCGGCTTTGCCGCGCAGGGCGGCGG CCTGCTCGATGGCGATGGCGTGCGCGGCACCCAGCGCCAGATCTCGGTCTTCGCGGGCGACGAATGGCAGGTGACCGATC GCCTTTCGGTCGACGGCGGCATCCGCTACGAGGACATCCGCTACGATATCACCAACCTCACCCTTGGTGCGGCGGTGGCG GTCAACGGCGGCGGCGGGGCCGATGGCAACCCGCTGACGCTGTGGGACAACACCCGCAACACCTATGGCGCGCCGACCAA CACGAAGCGCAACTTCCACTACCTCAACTACACCGGCGCGGTGAACTACGAGGTCAGCGACAATTTCCAGGCCTATGTCC GCTATACCCGCGGCAAGAAGGCCCCGGACTTCCGCGGCATCGCCGATATCGACACGCCCAGCGAAATCTCCACGCAGTTT CCCGAACCGCAGGTCATCACGCAGGTCGAGGTTGGCCTGAAGTACCGTCAGGACAACCTGCGGGTCGCGCTGTTCCCGTT CTACTCGAAGCTGTCGAATGTCGGCTCGACCCAGACCTTCACCGACGAGAACGGCAAGTTCTACACGCCGCCGACGGTCT ATGGCCAGATCGAGACCTATGGCGTCGAGATCGATGCCGATGCCGACATCGGCTCGATGCTGAACCTCCGCACCGCGATC ACGTTGCAGAACCCCAAGGCCTCGAAGTTCGGCCTTTGGATCGCCAACGACCCGGGCTCGGCGGACGACGAGCTTCAGTC GACCCCCAAGGGCGATGCCGACAACAACCCGAAGATCCTGACCCGCACCACTGCCACGCTGACGCCGGTTGACAGCCTCT CGCTGTTCCTCACGCACAGCTACACCGGCAAGCGCGCCGCCAACCGTGCGAACGCCTGGTATCTTCCCGGCTTCCACACC TTCGATTTCGGCGCGGCCTACGAGTTCGGTCCGGACAAGCGGTTCAAGTTGCAGGCGAACGTGAACAACGTGTTCAATCA GTTCGGCATCATGTCGTGGGCGCGCTCGGGCGGTTTCCTCGCCTCGCTCGACCGCCAGGGGCTGACGAAGGAAGCCGTCG CGGCCGATCCGAACCAGCTTCTCAGCATCGTCGCGGTCCAGCCGCGCTCGTTCTGGTTGACCGGTACGGTCAAGTTCTGA
Upstream 100 bases:
>100_bases AATCAAAATCAATCATATTATGTCTTTCACAATCGATCATTTTTGATTACTGCTCCTGTGAAAGGTCCACAACGGACCCG AATCCATGGGGGATGACCTG
Downstream 100 bases:
>100_bases GGGTTCGCAAGACCCTCGCTCCCCGGAAGCCCCGGACGCCGCAACGTCCGGGGCTTTCCTGTTCCTGGCGTCAGAGGACT TCGAAAAGTCCCGCCGCGCC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor-Like Protein; Nb-Dependent Receptor Plug
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MKFADTIRTSASLAALAVAALAAPALAQDSAQADGAAAADNQIVVTGVFSAKSIENAPISISAVTAEELSQQIANSSADL IRNVPGVFVNSSLGEIRNVVFSRGVSANSLDGDGGYYYVSMQEDGLPVEPITSGNFGPDYFSRPDIMLDRLEGLRGGTAT VTGNNAPGGIFNYISRTGKSHPGFEVQGKLGLEGDGKNPYYRVDAYAGGEVGNGLYYAIGGFYRKSDGSRDPGYALNKGG QIRANLLWDYGNGSVRFDAKYLNDHNGWFEFTPAFNYDDPKIAAGFDNTSSVLPPANAHSFTNPDGSTGSWDASDLVHAR TLSFGMTWDHELADGIKVQNRARYSENKTDWSTGGLIFPLGVDDFFLSILTGTLGLPGTTTYKVRGTDQVAAEVFSFSGF DHSVVTNNLPNQHILENGVLSQAALSTKYRSRSFQDQFTLSASLGDHSLAAGASFAHSRYSQANGAAGIGVSALTPTPQV YDITHTLPDGTVLQVTDPAGFAAQGGGLLDGDGVRGTQRQISVFAGDEWQVTDRLSVDGGIRYEDIRYDITNLTLGAAVA VNGGGGADGNPLTLWDNTRNTYGAPTNTKRNFHYLNYTGAVNYEVSDNFQAYVRYTRGKKAPDFRGIADIDTPSEISTQF PEPQVITQVEVGLKYRQDNLRVALFPFYSKLSNVGSTQTFTDENGKFYTPPTVYGQIETYGVEIDADADIGSMLNLRTAI TLQNPKASKFGLWIANDPGSADDELQSTPKGDADNNPKILTRTTATLTPVDSLSLFLTHSYTGKRAANRANAWYLPGFHT FDFGAAYEFGPDKRFKLQANVNNVFNQFGIMSWARSGGFLASLDRQGLTKEAVAADPNQLLSIVAVQPRSFWLTGTVKF
Sequences:
>Translated_879_residues MKFADTIRTSASLAALAVAALAAPALAQDSAQADGAAAADNQIVVTGVFSAKSIENAPISISAVTAEELSQQIANSSADL IRNVPGVFVNSSLGEIRNVVFSRGVSANSLDGDGGYYYVSMQEDGLPVEPITSGNFGPDYFSRPDIMLDRLEGLRGGTAT VTGNNAPGGIFNYISRTGKSHPGFEVQGKLGLEGDGKNPYYRVDAYAGGEVGNGLYYAIGGFYRKSDGSRDPGYALNKGG QIRANLLWDYGNGSVRFDAKYLNDHNGWFEFTPAFNYDDPKIAAGFDNTSSVLPPANAHSFTNPDGSTGSWDASDLVHAR TLSFGMTWDHELADGIKVQNRARYSENKTDWSTGGLIFPLGVDDFFLSILTGTLGLPGTTTYKVRGTDQVAAEVFSFSGF DHSVVTNNLPNQHILENGVLSQAALSTKYRSRSFQDQFTLSASLGDHSLAAGASFAHSRYSQANGAAGIGVSALTPTPQV YDITHTLPDGTVLQVTDPAGFAAQGGGLLDGDGVRGTQRQISVFAGDEWQVTDRLSVDGGIRYEDIRYDITNLTLGAAVA VNGGGGADGNPLTLWDNTRNTYGAPTNTKRNFHYLNYTGAVNYEVSDNFQAYVRYTRGKKAPDFRGIADIDTPSEISTQF PEPQVITQVEVGLKYRQDNLRVALFPFYSKLSNVGSTQTFTDENGKFYTPPTVYGQIETYGVEIDADADIGSMLNLRTAI TLQNPKASKFGLWIANDPGSADDELQSTPKGDADNNPKILTRTTATLTPVDSLSLFLTHSYTGKRAANRANAWYLPGFHT FDFGAAYEFGPDKRFKLQANVNNVFNQFGIMSWARSGGFLASLDRQGLTKEAVAADPNQLLSIVAVQPRSFWLTGTVKF >Mature_879_residues MKFADTIRTSASLAALAVAALAAPALAQDSAQADGAAAADNQIVVTGVFSAKSIENAPISISAVTAEELSQQIANSSADL IRNVPGVFVNSSLGEIRNVVFSRGVSANSLDGDGGYYYVSMQEDGLPVEPITSGNFGPDYFSRPDIMLDRLEGLRGGTAT VTGNNAPGGIFNYISRTGKSHPGFEVQGKLGLEGDGKNPYYRVDAYAGGEVGNGLYYAIGGFYRKSDGSRDPGYALNKGG QIRANLLWDYGNGSVRFDAKYLNDHNGWFEFTPAFNYDDPKIAAGFDNTSSVLPPANAHSFTNPDGSTGSWDASDLVHAR TLSFGMTWDHELADGIKVQNRARYSENKTDWSTGGLIFPLGVDDFFLSILTGTLGLPGTTTYKVRGTDQVAAEVFSFSGF DHSVVTNNLPNQHILENGVLSQAALSTKYRSRSFQDQFTLSASLGDHSLAAGASFAHSRYSQANGAAGIGVSALTPTPQV YDITHTLPDGTVLQVTDPAGFAAQGGGLLDGDGVRGTQRQISVFAGDEWQVTDRLSVDGGIRYEDIRYDITNLTLGAAVA VNGGGGADGNPLTLWDNTRNTYGAPTNTKRNFHYLNYTGAVNYEVSDNFQAYVRYTRGKKAPDFRGIADIDTPSEISTQF PEPQVITQVEVGLKYRQDNLRVALFPFYSKLSNVGSTQTFTDENGKFYTPPTVYGQIETYGVEIDADADIGSMLNLRTAI TLQNPKASKFGLWIANDPGSADDELQSTPKGDADNNPKILTRTTATLTPVDSLSLFLTHSYTGKRAANRANAWYLPGFHT FDFGAAYEFGPDKRFKLQANVNNVFNQFGIMSWARSGGFLASLDRQGLTKEAVAADPNQLLSIVAVQPRSFWLTGTVKF
Specific function: This Receptor Binds The Ferrichrome-Iron Ligand. It Interacts With The Tonb Protein, Which Is Responsible For Energy Coupling Of The Ferrichrome-Promoted Iron Transport System. Acts As A Receptor For Bacteriophage T5 As Well As T1, Phi80 And Colicin M. B
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786344, Length=845, Percent_Identity=22.2485207100592, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94388; Mature: 94388
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFADTIRTSASLAALAVAALAAPALAQDSAQADGAAAADNQIVVTGVFSAKSIENAPIS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEE ISAVTAEELSQQIANSSADLIRNVPGVFVNSSLGEIRNVVFSRGVSANSLDGDGGYYYVS EEEECHHHHHHHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEE MQEDGLPVEPITSGNFGPDYFSRPDIMLDRLEGLRGGTATVTGNNAPGGIFNYISRTGKS EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCC HPGFEVQGKLGLEGDGKNPYYRVDAYAGGEVGNGLYYAIGGFYRKSDGSRDPGYALNKGG CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCEEECCCCCCCCCCEECCCC QIRANLLWDYGNGSVRFDAKYLNDHNGWFEFTPAFNYDDPKIAAGFDNTSSVLPPANAHS EEEEEEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCC FTNPDGSTGSWDASDLVHARTLSFGMTWDHELADGIKVQNRARYSENKTDWSTGGLIFPL CCCCCCCCCCCCHHHHEEEEEEEECCCCCHHHHCCCEECCHHHCCCCCCCCCCCCEEEEC GVDDFFLSILTGTLGLPGTTTYKVRGTDQVAAEVFSFSGFDHSVVTNNLPNQHILENGVL CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHEECCCCCHHHHHCCCH SQAALSTKYRSRSFQDQFTLSASLGDHSLAAGASFAHSRYSQANGAAGIGVSALTPTPQV HHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHCCCCCCCCCEEECCCCCCE YDITHTLPDGTVLQVTDPAGFAAQGGGLLDGDGVRGTQRQISVFAGDEWQVTDRLSVDGG EEEEEECCCCEEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEEEEEEECCCC IRYEDIRYDITNLTLGAAVAVNGGGGADGNPLTLWDNTRNTYGAPTNTKRNFHYLNYTGA CEEEEEEEEECEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCE VNYEVSDNFQAYVRYTRGKKAPDFRGIADIDTPSEISTQFPEPQVITQVEVGLKYRQDNL EEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECEEEECCCC RVALFPFYSKLSNVGSTQTFTDENGKFYTPPTVYGQIETYGVEIDADADIGSMLNLRTAI EEEEEEHHHHHHCCCCCCEEECCCCCEECCCCEEEEEEEEEEEEECCCCCCHHEEEEEEE TLQNPKASKFGLWIANDPGSADDELQSTPKGDADNNPKILTRTTATLTPVDSLSLFLTHS EECCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEC YTGKRAANRANAWYLPGFHTFDFGAAYEFGPDKRFKLQANVNNVFNQFGIMSWARSGGFL CCCCHHCCCCCEEECCCCCCCCCCCEEECCCCCEEEEEECHHHHHHHHHHHHHHCCCCEE ASLDRQGLTKEAVAADPNQLLSIVAVQPRSFWLTGTVKF EECCCCCCCHHHHHCCHHHEEEEEEECCCEEEEEEEEEC >Mature Secondary Structure MKFADTIRTSASLAALAVAALAAPALAQDSAQADGAAAADNQIVVTGVFSAKSIENAPIS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEE ISAVTAEELSQQIANSSADLIRNVPGVFVNSSLGEIRNVVFSRGVSANSLDGDGGYYYVS EEEECHHHHHHHHHCCHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEE MQEDGLPVEPITSGNFGPDYFSRPDIMLDRLEGLRGGTATVTGNNAPGGIFNYISRTGKS EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCC HPGFEVQGKLGLEGDGKNPYYRVDAYAGGEVGNGLYYAIGGFYRKSDGSRDPGYALNKGG CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCEEECCCCCCCCCCEECCCC QIRANLLWDYGNGSVRFDAKYLNDHNGWFEFTPAFNYDDPKIAAGFDNTSSVLPPANAHS EEEEEEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCC FTNPDGSTGSWDASDLVHARTLSFGMTWDHELADGIKVQNRARYSENKTDWSTGGLIFPL CCCCCCCCCCCCHHHHEEEEEEEECCCCCHHHHCCCEECCHHHCCCCCCCCCCCCEEEEC GVDDFFLSILTGTLGLPGTTTYKVRGTDQVAAEVFSFSGFDHSVVTNNLPNQHILENGVL CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHEECCCCCHHHHHCCCH SQAALSTKYRSRSFQDQFTLSASLGDHSLAAGASFAHSRYSQANGAAGIGVSALTPTPQV HHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHCCCCCCCCCEEECCCCCCE YDITHTLPDGTVLQVTDPAGFAAQGGGLLDGDGVRGTQRQISVFAGDEWQVTDRLSVDGG EEEEEECCCCEEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEEEEEEECCCC IRYEDIRYDITNLTLGAAVAVNGGGGADGNPLTLWDNTRNTYGAPTNTKRNFHYLNYTGA CEEEEEEEEECEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCE VNYEVSDNFQAYVRYTRGKKAPDFRGIADIDTPSEISTQFPEPQVITQVEVGLKYRQDNL EEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECEEEECCCC RVALFPFYSKLSNVGSTQTFTDENGKFYTPPTVYGQIETYGVEIDADADIGSMLNLRTAI EEEEEEHHHHHHCCCCCCEEECCCCCEECCCCEEEEEEEEEEEEECCCCCCHHEEEEEEE TLQNPKASKFGLWIANDPGSADDELQSTPKGDADNNPKILTRTTATLTPVDSLSLFLTHS EECCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEC YTGKRAANRANAWYLPGFHTFDFGAAYEFGPDKRFKLQANVNNVFNQFGIMSWARSGGFL CCCCHHCCCCCEEECCCCCCCCCCCEEECCCCCEEEEEECHHHHHHHHHHHHHHCCCCEE ASLDRQGLTKEAVAADPNQLLSIVAVQPRSFWLTGTVKF EECCCCCCCHHHHHCCHHHEEEEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA