Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is engA
Identifier: 87198885
GI number: 87198885
Start: 913308
End: 914693
Strand: Direct
Name: engA
Synonym: Saro_0863
Alternate gene names: 87198885
Gene position: 913308-914693 (Clockwise)
Preceding gene: 87198883
Following gene: 87198888
Centisome position: 25.64
GC content: 64.86
Gene sequence:
>1386_bases ATGCGCCCTCAGGTAATCATCATCGGACGCCCCAATGTGGGCAAGTCCACGCTGTTCAACCGACTCGTCGGCAAGAAGCT GGCGCTGGTCGACGACCAGCCGGGCGTGACCCGCGACCGCCGTTTTGGCGATGCTTCTCTACTGGGTCTCGACTTCACCA TCGTCGATACCGCCGGTTGGGAGGACGAGGACCCCTCGACGCTGCCCGGCCGCATGCGCAAGCAGACAGAGGCTTCGCTC GTCGGCGCGGATGTCGCCTTGTTCGTCATCGATGCGCGCGCGGGCGTCACGCCGCTGGACGAGGAAATCGCCCGTTACCT GCGCCAGAGCACGGTGCCGATCGTACTCATGGCCAACAAGGCCGAAGGCCGCGCCGGCGATCCCGGGATTTTCGAGGCAT TCTCGCTCGGCTTCGGTGAACCCGTCGCCTTTTCCGCCGAACATGGTCAGGGCCTTGCCGACCTTTTCGAGGCGCTGCTG CCGCTGATCGGCGAAAAGCAGGACGACGAGGACGGCGAAGGTGAAGAGGCCGAGGACGAGGAAGAGGAGTTCGATCCCGA ATCCGTTCTCAAGCTGGCCATCGTGGGCCGTCCCAACGCCGGCAAGTCGACGCTGATCAACAAGCTGCTCGGCGAGGATC GCCTGCTGACCGGGCCGGAAGCCGGGATCACCCGCGATTCCATCGCCATCGACTGGCAGTGGTTCGATCCGGAACGCGAA GCCTATCGCCCGGTCCGCCTGATCGACACGGCCGGCATGCGCAAGAAGGCGCAGGTCACCGACAAGCTCGAAAAGCTTTC TGTCGCCGACGCGCGCCATGCCATCGATTTCGCCGAAGTCGTGGTGCTGGTTCTCGATGCCACGCGCGGGCTTGAACATC AGGATCTCAAGATCGCCTCGATGGTGATCGAAGAAGGCCGCGCACTGATGATCGCGATCAACAAGTGGGATGTCGCCGAA GATCCTTCGGGCCTGTTCCAAGGTATCCGCAAGGCGCTCGACGAAGGGCTGGCGCAGGTGCGCGGCGTGCCATTGCTCGC CATTTCGGGCCGCACCGGCAAGGGATTGGACGAACTGCTGAAAGCGGCCTTCGAAATCCGCGCCGCCTGGTCGAAGCGCG TGCCGACCGCCGCTCTCAACCGCTGGTTCGACGACGCGCTCGCCGCCAATCCGCCGCCCGCGCCCGGCGGACGCCGGATC AAGCTGCGCTACATCACCCAGGCCAAGACGCGTCCCCCCGGTTTCGTTCTGTTCGGCACGCGTCTGGACCAGTTGCCCGA AAGCTACCGGCGCTATCTGATCAACGGCATCCGGCGCGAGCTGGGCTTCGATGCCGTGCCGATCCGCCTGACCCTGCGCA GCCCCAAGAACCCGTTCGCCAAGTAG
Upstream 100 bases:
>100_bases TTATGTTCATACTCCCGTGAATGGTTAATGGCGGCATAACGAATGCACCGGACTTAAAGCCGTGCTTGCGTTCACGCGCA GGAACAGCCACGGAAAAACC
Downstream 100 bases:
>100_bases TCAGAACGCTGCCTTGACCCCGACGCTCCACCGGCGCGGGGCGGCGGGCCCGAGGGCGCGCGGGTCCTGCGCGTCGGGCG CTTCGGCAAGATAGACCTCG
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MRPQVIIIGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRRFGDASLLGLDFTIVDTAGWEDEDPSTLPGRMRKQTEASL VGADVALFVIDARAGVTPLDEEIARYLRQSTVPIVLMANKAEGRAGDPGIFEAFSLGFGEPVAFSAEHGQGLADLFEALL PLIGEKQDDEDGEGEEAEDEEEEFDPESVLKLAIVGRPNAGKSTLINKLLGEDRLLTGPEAGITRDSIAIDWQWFDPERE AYRPVRLIDTAGMRKKAQVTDKLEKLSVADARHAIDFAEVVVLVLDATRGLEHQDLKIASMVIEEGRALMIAINKWDVAE DPSGLFQGIRKALDEGLAQVRGVPLLAISGRTGKGLDELLKAAFEIRAAWSKRVPTAALNRWFDDALAANPPPAPGGRRI KLRYITQAKTRPPGFVLFGTRLDQLPESYRRYLINGIRRELGFDAVPIRLTLRSPKNPFAK
Sequences:
>Translated_461_residues MRPQVIIIGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRRFGDASLLGLDFTIVDTAGWEDEDPSTLPGRMRKQTEASL VGADVALFVIDARAGVTPLDEEIARYLRQSTVPIVLMANKAEGRAGDPGIFEAFSLGFGEPVAFSAEHGQGLADLFEALL PLIGEKQDDEDGEGEEAEDEEEEFDPESVLKLAIVGRPNAGKSTLINKLLGEDRLLTGPEAGITRDSIAIDWQWFDPERE AYRPVRLIDTAGMRKKAQVTDKLEKLSVADARHAIDFAEVVVLVLDATRGLEHQDLKIASMVIEEGRALMIAINKWDVAE DPSGLFQGIRKALDEGLAQVRGVPLLAISGRTGKGLDELLKAAFEIRAAWSKRVPTAALNRWFDDALAANPPPAPGGRRI KLRYITQAKTRPPGFVLFGTRLDQLPESYRRYLINGIRRELGFDAVPIRLTLRSPKNPFAK >Mature_461_residues MRPQVIIIGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRRFGDASLLGLDFTIVDTAGWEDEDPSTLPGRMRKQTEASL VGADVALFVIDARAGVTPLDEEIARYLRQSTVPIVLMANKAEGRAGDPGIFEAFSLGFGEPVAFSAEHGQGLADLFEALL PLIGEKQDDEDGEGEEAEDEEEEFDPESVLKLAIVGRPNAGKSTLINKLLGEDRLLTGPEAGITRDSIAIDWQWFDPERE AYRPVRLIDTAGMRKKAQVTDKLEKLSVADARHAIDFAEVVVLVLDATRGLEHQDLKIASMVIEEGRALMIAINKWDVAE DPSGLFQGIRKALDEGLAQVRGVPLLAISGRTGKGLDELLKAAFEIRAAWSKRVPTAALNRWFDDALAANPPPAPGGRRI KLRYITQAKTRPPGFVLFGTRLDQLPESYRRYLINGIRRELGFDAVPIRLTLRSPKNPFAK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=479, Percent_Identity=41.3361169102296, Blast_Score=322, Evalue=3e-89, Organism=Escherichia coli, GI1788919, Length=150, Percent_Identity=31.3333333333333, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI2367268, Length=177, Percent_Identity=30.5084745762712, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_NOVAD (Q2GA15)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496142.1 - ProteinModelPortal: Q2GA15 - SMR: Q2GA15 - STRING: Q2GA15 - GeneID: 3915919 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_0863 - NMPDR: fig|48935.1.peg.3418 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q2GA15 - ProtClustDB: PRK00093 - BioCyc: NARO279238:SARO_0863-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 50626; Mature: 50626
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPQVIIIGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRRFGDASLLGLDFTIVDTAGW CCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCC EDEDPSTLPGRMRKQTEASLVGADVALFVIDARAGVTPLDEEIARYLRQSTVPIVLMANK CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEC AEGRAGDPGIFEAFSLGFGEPVAFSAEHGQGLADLFEALLPLIGEKQDDEDGEGEEAEDE CCCCCCCCCHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH EEEFDPESVLKLAIVGRPNAGKSTLINKLLGEDRLLTGPEAGITRDSIAIDWQWFDPERE HHHCCHHHEEEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEEECCHHH AYRPVRLIDTAGMRKKAQVTDKLEKLSVADARHAIDFAEVVVLVLDATRGLEHQDLKIAS HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH MVIEEGRALMIAINKWDVAEDPSGLFQGIRKALDEGLAQVRGVPLLAISGRTGKGLDELL HHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH KAAFEIRAAWSKRVPTAALNRWFDDALAANPPPAPGGRRIKLRYITQAKTRPPGFVLFGT HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECC RLDQLPESYRRYLINGIRRELGFDAVPIRLTLRSPKNPFAK CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure MRPQVIIIGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRRFGDASLLGLDFTIVDTAGW CCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCC EDEDPSTLPGRMRKQTEASLVGADVALFVIDARAGVTPLDEEIARYLRQSTVPIVLMANK CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEC AEGRAGDPGIFEAFSLGFGEPVAFSAEHGQGLADLFEALLPLIGEKQDDEDGEGEEAEDE CCCCCCCCCHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH EEEFDPESVLKLAIVGRPNAGKSTLINKLLGEDRLLTGPEAGITRDSIAIDWQWFDPERE HHHCCHHHEEEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEEECCHHH AYRPVRLIDTAGMRKKAQVTDKLEKLSVADARHAIDFAEVVVLVLDATRGLEHQDLKIAS HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH MVIEEGRALMIAINKWDVAEDPSGLFQGIRKALDEGLAQVRGVPLLAISGRTGKGLDELL HHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH KAAFEIRAAWSKRVPTAALNRWFDDALAANPPPAPGGRRIKLRYITQAKTRPPGFVLFGT HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECC RLDQLPESYRRYLINGIRRELGFDAVPIRLTLRSPKNPFAK CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA