Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198869
Identifier: 87198869
GI number: 87198869
Start: 898482
End: 898943
Strand: Direct
Name: 87198869
Synonym: Saro_0847
Alternate gene names: NA
Gene position: 898482-898943 (Clockwise)
Preceding gene: 87198867
Following gene: 87198874
Centisome position: 25.23
GC content: 64.5
Gene sequence:
>462_bases GTGCGCGGGTCTAGCAACTGGAGCCGGAAGGGGCGGAAAAAGAAGGAAGAAATGGGCCCGGTCAACTGGATAGCCGTTGT CGTTGCAACCCTCGCGGCGCTTGGCGCCTCGGCGCTCTGGTATGGCCCGATGTTCGGCCGTGCGCGCCTTGAGGAAGTCG GACCCGGCGGCCTCGGCATTCGACGCTCGCCGGGGCGCACGGCTGCGATCACAGCCGCACTGATGCTGATCACCGCCACG ATGATGGGCCATATGTTCGCCCGCGTGGGCGAGGCCACGCTTGCCGTGAAGTGGTGGCTCTATTTCATGATGTCGATCGG GCTGGCGGGCGCATTCGTCGTTCCCGCGCTGTGGATCAGCTATACCCACCAGCGGATCAGCACGCGGCTGGCGCTGATCG ATGGAGGCTTCTGGATCTTCGCCTATCTTGCGATGGGCCTGGCCTTCTTCCTGCTCGGCTAG
Upstream 100 bases:
>100_bases GGAATCTCTCGCGGGGGAATCTGGCTTGCCATCTTGGCGCGGCCCATAGGCGAAAATGCACGGCGCGTCACCTGTAGCGG TCGGGTGATTGCATTGACGG
Downstream 100 bases:
>100_bases CGCGTAGGCACGATCTCGACGATGACGTCGCCGGGCTCCAGAGCTTGCGCGGCGTCTTCCCAGAAGCCGACGATCCTGTC GCCGCGATGGATGCGCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRGSSNWSRKGRKKKEEMGPVNWIAVVVATLAALGASALWYGPMFGRARLEEVGPGGLGIRRSPGRTAAITAALMLITAT MMGHMFARVGEATLAVKWWLYFMMSIGLAGAFVVPALWISYTHQRISTRLALIDGGFWIFAYLAMGLAFFLLG
Sequences:
>Translated_153_residues MRGSSNWSRKGRKKKEEMGPVNWIAVVVATLAALGASALWYGPMFGRARLEEVGPGGLGIRRSPGRTAAITAALMLITAT MMGHMFARVGEATLAVKWWLYFMMSIGLAGAFVVPALWISYTHQRISTRLALIDGGFWIFAYLAMGLAFFLLG >Mature_153_residues MRGSSNWSRKGRKKKEEMGPVNWIAVVVATLAALGASALWYGPMFGRARLEEVGPGGLGIRRSPGRTAAITAALMLITAT MMGHMFARVGEATLAVKWWLYFMMSIGLAGAFVVPALWISYTHQRISTRLALIDGGFWIFAYLAMGLAFFLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16687; Mature: 16687
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSSNWSRKGRKKKEEMGPVNWIAVVVATLAALGASALWYGPMFGRARLEEVGPGGLGI CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHCCCCCCCC RRSPGRTAAITAALMLITATMMGHMFARVGEATLAVKWWLYFMMSIGLAGAFVVPALWIS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTHQRISTRLALIDGGFWIFAYLAMGLAFFLLG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGSSNWSRKGRKKKEEMGPVNWIAVVVATLAALGASALWYGPMFGRARLEEVGPGGLGI CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHCCCCCCCC RRSPGRTAAITAALMLITATMMGHMFARVGEATLAVKWWLYFMMSIGLAGAFVVPALWIS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTHQRISTRLALIDGGFWIFAYLAMGLAFFLLG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA