Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198864
Identifier: 87198864
GI number: 87198864
Start: 892181
End: 892828
Strand: Direct
Name: 87198864
Synonym: Saro_0842
Alternate gene names: NA
Gene position: 892181-892828 (Clockwise)
Preceding gene: 87198863
Following gene: 87198865
Centisome position: 25.05
GC content: 65.74
Gene sequence:
>648_bases ATGTTCGGCTGGTTCCACCGCCTCCTGCCCAAGTCGGGCGACTTCTTCGGCATGTTCGAACGCCACGCGGCGGCGTGCGT CGATGCGGCTGATGCGCTTGCCAAGCTGACCCGCGCGCACGGCGATTCCGCGCAGTGGGTCACCCGCATCCGCGACCGCG AGCATGATGCGGACGACGTGATCCGCGAAGTCCTGTTCACCGTGCGTCGCACGTTCCTTACCCCGTTCGACCGTGGCGCG ATCACTTCGCTGATCGGCGCGATGGACGACACCATCGACGAGATGCAGGCCGCCGCCTCGGCGATCGAGCTTTACGAGAT CGTCGGGTTCGAGCCCGAGATGCAGGCGATGGCCGACAAGATCGTCGAAGCCGTCGGCCTGATCGCCGAAGCCATGCCGC TGCTGCGCGATATCGAGCGCAACGGTTCGCGTCTCCACACCCTGACCGAGCGGATCGTCCAGCTCGAGGGCGAAGTCGAC CTCGTGCACCAGGCGGGCCTCAAGGCCAACTTCCTGCGCCACCGCACCGATGGCGACCAGGTCGCGTTCATCGTCTCGCG CGAGATCTTCAAGCACCTCGAGAAGATCGCCGACGCGTTCGAGGACGTGGCGAACGAGATCGACGCGCTGGTCATCGACC ACGCCTGA
Upstream 100 bases:
>100_bases TCGCTTCCGGATTGTTACTCGCGCGTGACTGCCCTAGTGCCGCTGCCTGCGGGGGCGAGTCGCGTCCCGTGTGCGTGACG GCAATTCGGGAAGCAATGCG
Downstream 100 bases:
>100_bases AGGCGCGGCACAGGAGCTGATCCGATGCACGAGCTCGCCTTTCCGCTGCTGGTCGGCCTGATCGCGCTGGCGCTGGCCTT CGACTTCCTGAACGGCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MFGWFHRLLPKSGDFFGMFERHAAACVDAADALAKLTRAHGDSAQWVTRIRDREHDADDVIREVLFTVRRTFLTPFDRGA ITSLIGAMDDTIDEMQAAASAIELYEIVGFEPEMQAMADKIVEAVGLIAEAMPLLRDIERNGSRLHTLTERIVQLEGEVD LVHQAGLKANFLRHRTDGDQVAFIVSREIFKHLEKIADAFEDVANEIDALVIDHA
Sequences:
>Translated_215_residues MFGWFHRLLPKSGDFFGMFERHAAACVDAADALAKLTRAHGDSAQWVTRIRDREHDADDVIREVLFTVRRTFLTPFDRGA ITSLIGAMDDTIDEMQAAASAIELYEIVGFEPEMQAMADKIVEAVGLIAEAMPLLRDIERNGSRLHTLTERIVQLEGEVD LVHQAGLKANFLRHRTDGDQVAFIVSREIFKHLEKIADAFEDVANEIDALVIDHA >Mature_215_residues MFGWFHRLLPKSGDFFGMFERHAAACVDAADALAKLTRAHGDSAQWVTRIRDREHDADDVIREVLFTVRRTFLTPFDRGA ITSLIGAMDDTIDEMQAAASAIELYEIVGFEPEMQAMADKIVEAVGLIAEAMPLLRDIERNGSRLHTLTERIVQLEGEVD LVHQAGLKANFLRHRTDGDQVAFIVSREIFKHLEKIADAFEDVANEIDALVIDHA
Specific function: Could be involved in orthophosphate transport [H]
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 24115; Mature: 24115
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGWFHRLLPKSGDFFGMFERHAAACVDAADALAKLTRAHGDSAQWVTRIRDREHDADDV CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHH IREVLFTVRRTFLTPFDRGAITSLIGAMDDTIDEMQAAASAIELYEIVGFEPEMQAMADK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IVEAVGLIAEAMPLLRDIERNGSRLHTLTERIVQLEGEVDLVHQAGLKANFLRHRTDGDQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCH VAFIVSREIFKHLEKIADAFEDVANEIDALVIDHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFGWFHRLLPKSGDFFGMFERHAAACVDAADALAKLTRAHGDSAQWVTRIRDREHDADDV CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHH IREVLFTVRRTFLTPFDRGAITSLIGAMDDTIDEMQAAASAIELYEIVGFEPEMQAMADK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IVEAVGLIAEAMPLLRDIERNGSRLHTLTERIVQLEGEVDLVHQAGLKANFLRHRTDGDQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCH VAFIVSREIFKHLEKIADAFEDVANEIDALVIDHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]