Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is lrp [C]
Identifier: 87198850
GI number: 87198850
Start: 880677
End: 880988
Strand: Direct
Name: lrp [C]
Synonym: Saro_0828
Alternate gene names: 87198850
Gene position: 880677-880988 (Clockwise)
Preceding gene: 87198849
Following gene: 87198853
Centisome position: 24.73
GC content: 62.82
Gene sequence:
>312_bases ATGCATAGCGCAGCGGCGGATTCTTGTGCCGGCACGGAAATGCTCCTGCAGGTCACGGTCGATCGGCGTCGCCATGGCCG CAACGTTGTTTTCGACGAGGCTGTCCGGGACTGTCCGGAAGTGCTCGAATGCCTGCTGCTGTCAGGTGACATGGGATATT GGTTGCGCGTGCGCGTGGCCTCGCTTGCCGACTACGAGGACCTGCGCGAGCGGCTGCTCACGCTTCTGCCGGGCGTGCAG CGGATAACGGCATCCGTCGTCTTGCAGAGCATTGTCGGCAACGGAGCCGCCGCTCTTCTTTCAAGTGGCTGA
Upstream 100 bases:
>100_bases CTGATCGGCCTGCGCGCAGGGCAGTCCATCGACTGGCCCAACGTGCGCGGAAAGCAGCGCGCAATCACCATCGAGCAGGT CATCAAGCCAGGGGGCTGCC
Downstream 100 bases:
>100_bases AGCGACGTGAAAAAAACGGGGCGGCGCGCGATGCGCTCCGCCCCGAGTCGCGTCTCATGCGTCTGGTTCGCCTGAGAACG TCAGAACTTTACGGTGATCA
Product: AsnC family transcriptional regulator
Products: NA
Alternate protein names: Leucine-Responsive Regulatory Protein; Transcriptional Regulator AsnC Family
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVASLADYEDLRERLLTLLPGVQ RITASVVLQSIVGNGAAALLSSG
Sequences:
>Translated_103_residues MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVASLADYEDLRERLLTLLPGVQ RITASVVLQSIVGNGAAALLSSG >Mature_103_residues MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVASLADYEDLRERLLTLLPGVQ RITASVVLQSIVGNGAAALLSSG
Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11170; Mature: 11170
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVA CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SLADYEDLRERLLTLLPGVQRITASVVLQSIVGNGAAALLSSG HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MHSAAADSCAGTEMLLQVTVDRRRHGRNVVFDEAVRDCPEVLECLLLSGDMGYWLRVRVA CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SLADYEDLRERLLTLLPGVQRITASVVLQSIVGNGAAALLSSG HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA