Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is secE [C]
Identifier: 87198853
GI number: 87198853
Start: 882900
End: 883094
Strand: Direct
Name: secE [C]
Synonym: Saro_0831
Alternate gene names: 87198853
Gene position: 882900-883094 (Clockwise)
Preceding gene: 87198850
Following gene: 87198854
Centisome position: 24.79
GC content: 62.05
Gene sequence:
>195_bases ATGGCCAAGACCAGCCCCGGCGAGTTCTTCAACCAGGTCAAGGCGGAAGCGCGCAAGGTCGTCTGGCCGACCCGCCAGGA AACCACGACCACCGCGATCTTCGTCGGCATCATGATGCTGATCCTGGCGGTGTTCTTCCTTGGCGTCGATTCGCTGTTCA GCGCGATCGTCCGCTTCCTGCTTTCGCTCGCCTGA
Upstream 100 bases:
>100_bases GCCTGCCCCTCCCGGACCTGTCCGGGGCGGCGATTTCCCCTAGGCGGAAGAAACGAGTTTCATTTCAGGCGCAAGCCGCA GTCAGCAAGGCACGAGAGCA
Downstream 100 bases:
>100_bases CCAGACCAACCTCAGGACCAAGAGAAAAACATATGGCCCGCTGGTACATCATTCACGCCTATTCCGGTTTCGAGAACAAG GTCCGCGATGCGATCATCGC
Product: protein translocase subunit secE/sec61 gamma
Products: NA
Alternate protein names: SecE Subunit Of Protein Translocation Complex; Preprotein Translocase SecE Subunit
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MAKTSPGEFFNQVKAEARKVVWPTRQETTTTAIFVGIMMLILAVFFLGVDSLFSAIVRFLLSLA
Sequences:
>Translated_64_residues MAKTSPGEFFNQVKAEARKVVWPTRQETTTTAIFVGIMMLILAVFFLGVDSLFSAIVRFLLSLA >Mature_63_residues AKTSPGEFFNQVKAEARKVVWPTRQETTTTAIFVGIMMLILAVFFLGVDSLFSAIVRFLLSLA
Specific function: Essential For Protein Export. [C]
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7111; Mature: 6979
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTSPGEFFNQVKAEARKVVWPTRQETTTTAIFVGIMMLILAVFFLGVDSLFSAIVRFL CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLA HHCC >Mature Secondary Structure AKTSPGEFFNQVKAEARKVVWPTRQETTTTAIFVGIMMLILAVFFLGVDSLFSAIVRFL CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLA HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA