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The map label for this gene is 87198839

Identifier: 87198839

GI number: 87198839

Start: 871129

End: 871578

Strand: Direct

Name: 87198839

Synonym: Saro_0817

Alternate gene names: NA

Gene position: 871129-871578 (Clockwise)

Preceding gene: 87198837

Following gene: 87198841

Centisome position: 24.46

GC content: 65.11

Gene sequence:

>450_bases
ATGCGTGACGTGGTCCGGCAACGGGCAGGGCGTCATATTCAAAGAGGGCAGGACAAGTTCATGGGCAAGTTCACGGGTGC
ATTTGTTGTAGCAGGCCTTGCGGCTTCGGCTCTTGCGGGCGTGGCCGTCGCGGCCCCGGCCAAGGGTGATCCGGTGCTTG
GCAAGAAAGTGTTCATGCGCTGCGTCGCCTGCCACGCGGTCCAGCCGAACGCGCCGATGAAGATGGGCCCGAACCTTGCC
GGCGTGGTGGGGCGCAAGGCCGGCGCCGCGAACTTCAAGTATTCCGCCGCCATGAAGAAGGCCAACGTGAAGTGGGACGA
AGCCACGCTCGACAAGTGGCTGCTGAAGCCGTCGGCGGTCGTGCCCGGCACCTCGATGGCCTTCGCCGGCGTGCCCAATG
CCGAGGAACGCGCGGCGGTGATCGCCTATCTGAAGAAGCCGGTTCCCTGA

Upstream 100 bases:

>100_bases
CGCGGCGGCGGCGGCATGGCGAACGCACCTTTTTTCGTCGATCAGGTTTTCTGCTATGGCGCATCACCGTTCAGCCGCGA
TACAGCGCGCAGGAAAGACC

Downstream 100 bases:

>100_bases
GACTTGCGCTTCAGGGCGTGACGATCGCGAAAGTGGGGTCCGGCTTGTCGAGCCAGCCGGTTAGGCGGGCGAAGACTGCC
GGATCGCCTTCGATCGTGGC

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRDVVRQRAGRHIQRGQDKFMGKFTGAFVVAGLAASALAGVAVAAPAKGDPVLGKKVFMRCVACHAVQPNAPMKMGPNLA
GVVGRKAGAANFKYSAAMKKANVKWDEATLDKWLLKPSAVVPGTSMAFAGVPNAEERAAVIAYLKKPVP

Sequences:

>Translated_149_residues
MRDVVRQRAGRHIQRGQDKFMGKFTGAFVVAGLAASALAGVAVAAPAKGDPVLGKKVFMRCVACHAVQPNAPMKMGPNLA
GVVGRKAGAANFKYSAAMKKANVKWDEATLDKWLLKPSAVVPGTSMAFAGVPNAEERAAVIAYLKKPVP
>Mature_149_residues
MRDVVRQRAGRHIQRGQDKFMGKFTGAFVVAGLAASALAGVAVAAPAKGDPVLGKKVFMRCVACHAVQPNAPMKMGPNLA
GVVGRKAGAANFKYSAAMKKANVKWDEATLDKWLLKPSAVVPGTSMAFAGVPNAEERAAVIAYLKKPVP

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=100, Percent_Identity=48, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17539604, Length=99, Percent_Identity=47.4747474747475, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17566554, Length=100, Percent_Identity=46, Blast_Score=88, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322508, Length=88, Percent_Identity=44.3181818181818, Blast_Score=92, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6320796, Length=88, Percent_Identity=40.9090909090909, Blast_Score=88, Evalue=5e-19,
Organism=Drosophila melanogaster, GI17137204, Length=99, Percent_Identity=50.5050505050505, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17137228, Length=99, Percent_Identity=47.4747474747475, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15616; Mature: 15616

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVVRQRAGRHIQRGQDKFMGKFTGAFVVAGLAASALAGVAVAAPAKGDPVLGKKVFMR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHH
CVACHAVQPNAPMKMGPNLAGVVGRKAGAANFKYSAAMKKANVKWDEATLDKWLLKPSAV
HHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCC
VPGTSMAFAGVPNAEERAAVIAYLKKPVP
CCCCCEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDVVRQRAGRHIQRGQDKFMGKFTGAFVVAGLAASALAGVAVAAPAKGDPVLGKKVFMR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHH
CVACHAVQPNAPMKMGPNLAGVVGRKAGAANFKYSAAMKKANVKWDEATLDKWLLKPSAV
HHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCC
VPGTSMAFAGVPNAEERAAVIAYLKKPVP
CCCCCEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]