The gene/protein map for NC_007794 is currently unavailable.
Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is vanA [H]

Identifier: 87198731

GI number: 87198731

Start: 747979

End: 749004

Strand: Direct

Name: vanA [H]

Synonym: Saro_0707

Alternate gene names: 87198731

Gene position: 747979-749004 (Clockwise)

Preceding gene: 87198729

Following gene: 87198736

Centisome position: 21.0

GC content: 64.62

Gene sequence:

>1026_bases
ATGAGCGTGTTCCTTCGCAATGCCTGGTACATGGCGTGCTGGTCGCACGAGGTGCCGGAGGGGGGATTTCTCGCCCGCCG
CCTGCTGGACAAGCCCTGGGTGATCTGGCGCAAGGCAGACGGGACGCCGGTGATCATGGCCGATCGTTGCCCGCACCGGT
TCGTCCCGCTTAGCCGTGGGCAGCGCGATGGCGACATGATGCGGTGCGGCTATCACGGGCTGGCCTTCAGCAGCAGCGGC
GGCTGCGTGCACAACCCCTTTACCGATGAAGCACTGCCGCTGGCGCGGGTCGAGGTGCTGCCGGTGGTAGAGAAGCACAC
TGGCCTGTGGTTCTGGCCGGGGGATGCCGACCGAGCAGATCCGGCGCTGATCCCCGATTTCGGTTTCCTTGACGTCGAAC
GCCCGCTCCATCGCGGACACCTCAAAATGGATGCCGGCTACGAGCTGGTGACCGACAATCTGATGGACCTCAGCCACGCC
GAATTCATTCACCGCGACAGTTTCGGCGTGAACGGCTCCTTGCTGACTTGCGGCCAGCACGAAGTGGTGCAGGACGAGGG
CGGGGCAATCTGGAACAACTGGACGATGCCGGATTCCGAGCCGCCATCCTGGGCCGTGGCAATGCTGCCCGAAGGAGCCC
GGACCGACCAATGGCTCCATATGCGCTGGAATGCGCCTTCGTGTCTTGCGTTGTTCCTCGGTCTTGCTCGGTCGGGAACC
GATCGCAAGGACATGGTCGTGCCGCCGATGGCAGACCCGCACATCCTGACGCCGGAGACGGTGACATCGACGCACTACTT
CTACACCCACGAGCCGACGCCTGAAGCACATGCGCTGCTGGAGAAGGCCTTCCTCGAGGAGGATCACCCGATGCTCCACG
CACAGCAGGAGGCTATGGGCAGCGCCGATTTCTGGGACTTGCGCCCGGTGGTCCTGCCTTCCGATGCGGGTGCAATCCGC
GTTCGGCGGCGGATGATGCAGCTGCGACGGGCTGAAGCGGGTCTGGAGGAGGAGGCTGCCGCCTGA

Upstream 100 bases:

>100_bases
ACGACTTCCGGATTTCGGCTCACAGGGCTTTTCAACTTCGTGGCCATCGCTATAAAGAAACCAACTGGTTTGTTTGATTC
GACATACGGGGAGAATGGCG

Downstream 100 bases:

>100_bases
TTGGCAGGCAGCATCTCGGCCTCGCTCGATGCAAACGGTTCTAGGCAATCGACCCAGTCAGGCCGACTGCCTAGAACATC
GGGTGTGGATTGGCCGACTT

Product: Rieske (2Fe-2S) protein

Products: NA

Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSVFLRNAWYMACWSHEVPEGGFLARRLLDKPWVIWRKADGTPVIMADRCPHRFVPLSRGQRDGDMMRCGYHGLAFSSSG
GCVHNPFTDEALPLARVEVLPVVEKHTGLWFWPGDADRADPALIPDFGFLDVERPLHRGHLKMDAGYELVTDNLMDLSHA
EFIHRDSFGVNGSLLTCGQHEVVQDEGGAIWNNWTMPDSEPPSWAVAMLPEGARTDQWLHMRWNAPSCLALFLGLARSGT
DRKDMVVPPMADPHILTPETVTSTHYFYTHEPTPEAHALLEKAFLEEDHPMLHAQQEAMGSADFWDLRPVVLPSDAGAIR
VRRRMMQLRRAEAGLEEEAAA

Sequences:

>Translated_341_residues
MSVFLRNAWYMACWSHEVPEGGFLARRLLDKPWVIWRKADGTPVIMADRCPHRFVPLSRGQRDGDMMRCGYHGLAFSSSG
GCVHNPFTDEALPLARVEVLPVVEKHTGLWFWPGDADRADPALIPDFGFLDVERPLHRGHLKMDAGYELVTDNLMDLSHA
EFIHRDSFGVNGSLLTCGQHEVVQDEGGAIWNNWTMPDSEPPSWAVAMLPEGARTDQWLHMRWNAPSCLALFLGLARSGT
DRKDMVVPPMADPHILTPETVTSTHYFYTHEPTPEAHALLEKAFLEEDHPMLHAQQEAMGSADFWDLRPVVLPSDAGAIR
VRRRMMQLRRAEAGLEEEAAA
>Mature_340_residues
SVFLRNAWYMACWSHEVPEGGFLARRLLDKPWVIWRKADGTPVIMADRCPHRFVPLSRGQRDGDMMRCGYHGLAFSSSGG
CVHNPFTDEALPLARVEVLPVVEKHTGLWFWPGDADRADPALIPDFGFLDVERPLHRGHLKMDAGYELVTDNLMDLSHAE
FIHRDSFGVNGSLLTCGQHEVVQDEGGAIWNNWTMPDSEPPSWAVAMLPEGARTDQWLHMRWNAPSCLALFLGLARSGTD
RKDMVVPPMADPHILTPETVTSTHYFYTHEPTPEAHALLEKAFLEEDHPMLHAQQEAMGSADFWDLRPVVLPSDAGAIRV
RRRMMQLRRAEAGLEEEAAA

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.14.13.82 [H]

Molecular weight: Translated: 38392; Mature: 38261

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFLRNAWYMACWSHEVPEGGFLARRLLDKPWVIWRKADGTPVIMADRCPHRFVPLSRG
CEEEEECCEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCEECCCC
QRDGDMMRCGYHGLAFSSSGGCVHNPFTDEALPLARVEVLPVVEKHTGLWFWPGDADRAD
CCCCCEEEECCCCEEEECCCCEEECCCCCCCCCHHHEEEEEEEHHCCCEEEECCCCCCCC
PALIPDFGFLDVERPLHRGHLKMDAGYELVTDNLMDLSHAEFIHRDSFGVNGSLLTCGQH
CCCCCCCCCEECCCCHHCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
EVVQDEGGAIWNNWTMPDSEPPSWAVAMLPEGARTDQWLHMRWNAPSCLALFLGLARSGT
CEEECCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCCC
DRKDMVVPPMADPHILTPETVTSTHYFYTHEPTPEAHALLEKAFLEEDHPMLHAQQEAMG
CCCCEEECCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCC
SADFWDLRPVVLPSDAGAIRVRRRMMQLRRAEAGLEEEAAA
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SVFLRNAWYMACWSHEVPEGGFLARRLLDKPWVIWRKADGTPVIMADRCPHRFVPLSRG
EEEEECCEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCEECCCC
QRDGDMMRCGYHGLAFSSSGGCVHNPFTDEALPLARVEVLPVVEKHTGLWFWPGDADRAD
CCCCCEEEECCCCEEEECCCCEEECCCCCCCCCHHHEEEEEEEHHCCCEEEECCCCCCCC
PALIPDFGFLDVERPLHRGHLKMDAGYELVTDNLMDLSHAEFIHRDSFGVNGSLLTCGQH
CCCCCCCCCEECCCCHHCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
EVVQDEGGAIWNNWTMPDSEPPSWAVAMLPEGARTDQWLHMRWNAPSCLALFLGLARSGT
CEEECCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCCC
DRKDMVVPPMADPHILTPETVTSTHYFYTHEPTPEAHALLEKAFLEEDHPMLHAQQEAMG
CCCCEEECCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCC
SADFWDLRPVVLPSDAGAIRVRRRMMQLRRAEAGLEEEAAA
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9098058 [H]