Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198697
Identifier: 87198697
GI number: 87198697
Start: 708788
End: 709732
Strand: Direct
Name: 87198697
Synonym: Saro_0673
Alternate gene names: NA
Gene position: 708788-709732 (Clockwise)
Preceding gene: 87198696
Following gene: 87198698
Centisome position: 19.9
GC content: 64.87
Gene sequence:
>945_bases ATGCGCCTTGCGACCCTGAAGAATGGAACTCCCGACGGCCGGCTGGTCGTCGTCTCGCCTGACGCGACGGCCTGCGCCCC GGCGCCCATTGCCACGCTCCAGCAAGCGATCGAGCAGTGGGACGCTGTCGCTCCTGCACTGGCGGTCATCACGGATTTCC GCGAGCCGCTGGATCCACAAGCGGTCGCCGCGCCGCTTCCCCGCGCTTGGCAATGGCTCGACGGGTCGGCCTTCAAGAGC CACGGCGATCTCATGGACGCGGTATTGGGCATTACCAAACCCAAGACCGAAGTGCCGCTGATGTACCAAGGCATGTCCGA CACATTTCTTCCGCCGATCAGCGAGGCGCGTTTCCCGTCGGAGGATCTGGGCATCGATTTTGAAGGCGAGTTCGGTGTGA TCGTCGATGCCGTGCCGATGGGCGCCTCGGCCGAGCAGGCGATGAAGCACATCCGTCTCGTCGTGCAGATCAACGACTGG TCCCTGCGCAGCCTTGCCGGGCCGGAGATGAAGACCGGCTTCGGCTGGGTCCAGGCCAAGCCGGCCTGCGGGATGGCCCC GTTTGCGGTGACGCCGGACGAACTGGGCGATGGCTGGCGCGACGGGCGGGTCTGTCTTGACCTGCTGGTCGACTGGAATG GCAAGCGCTTCGGCGCCGCGAATGGCGGGTCGATGGAGTTTGGCTTCCACGAACTCGTTGCTCACGCCGCGCGGACACGG GACCTCGTTGCCGGCACGGTCATCGGGTCGGGCACCGTCTCCAATACCAATTTTCGCGAGATCGGTTCGTCCTGCATCGC CGAGCGACGGGGGATCGAAGTGCTGGATCTAGGCGAAGCTAGGACGCCCTTCATGGCGTTCGGCGATGTGGTCCGGATGG AAGCGGTGGATGGTTCCGGTCGGGCGCCTTTTGGTATGCTCGAACAGAAGGCTGTGCCTGCCTGA
Upstream 100 bases:
>100_bases GAGGTTGCATTCACAGCGCTTATCATCCGCGATAAAAACCATTCCTTTGTCGTGGCCGTAGGGCAGGGCTAGGCCATCGC TCAACTCCGGGAGATGAACG
Downstream 100 bases:
>100_bases CGTTCGGCCACTTGTCCTTCCTCCGATAATTGTTATAGCGCATAGCGAAATCGGAGGATGCCATGACCGGAACGAGTCTT TCCCACGCCGCGCTCGATCG
Product: fumarylacetoacetate (FAA) hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Hydroxylase; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase; Isomerase/Decarboxylase
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MRLATLKNGTPDGRLVVVSPDATACAPAPIATLQQAIEQWDAVAPALAVITDFREPLDPQAVAAPLPRAWQWLDGSAFKS HGDLMDAVLGITKPKTEVPLMYQGMSDTFLPPISEARFPSEDLGIDFEGEFGVIVDAVPMGASAEQAMKHIRLVVQINDW SLRSLAGPEMKTGFGWVQAKPACGMAPFAVTPDELGDGWRDGRVCLDLLVDWNGKRFGAANGGSMEFGFHELVAHAARTR DLVAGTVIGSGTVSNTNFREIGSSCIAERRGIEVLDLGEARTPFMAFGDVVRMEAVDGSGRAPFGMLEQKAVPA
Sequences:
>Translated_314_residues MRLATLKNGTPDGRLVVVSPDATACAPAPIATLQQAIEQWDAVAPALAVITDFREPLDPQAVAAPLPRAWQWLDGSAFKS HGDLMDAVLGITKPKTEVPLMYQGMSDTFLPPISEARFPSEDLGIDFEGEFGVIVDAVPMGASAEQAMKHIRLVVQINDW SLRSLAGPEMKTGFGWVQAKPACGMAPFAVTPDELGDGWRDGRVCLDLLVDWNGKRFGAANGGSMEFGFHELVAHAARTR DLVAGTVIGSGTVSNTNFREIGSSCIAERRGIEVLDLGEARTPFMAFGDVVRMEAVDGSGRAPFGMLEQKAVPA >Mature_314_residues MRLATLKNGTPDGRLVVVSPDATACAPAPIATLQQAIEQWDAVAPALAVITDFREPLDPQAVAAPLPRAWQWLDGSAFKS HGDLMDAVLGITKPKTEVPLMYQGMSDTFLPPISEARFPSEDLGIDFEGEFGVIVDAVPMGASAEQAMKHIRLVVQINDW SLRSLAGPEMKTGFGWVQAKPACGMAPFAVTPDELGDGWRDGRVCLDLLVDWNGKRFGAANGGSMEFGFHELVAHAARTR DLVAGTVIGSGTVSNTNFREIGSSCIAERRGIEVLDLGEARTPFMAFGDVVRMEAVDGSGRAPFGMLEQKAVPA
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33521; Mature: 33521
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLATLKNGTPDGRLVVVSPDATACAPAPIATLQQAIEQWDAVAPALAVITDFREPLDPQ CEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AVAAPLPRAWQWLDGSAFKSHGDLMDAVLGITKPKTEVPLMYQGMSDTFLPPISEARFPS HHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHCCCCC EDLGIDFEGEFGVIVDAVPMGASAEQAMKHIRLVVQINDWSLRSLAGPEMKTGFGWVQAK HHCCEEECCCCCEEEEECCCCCCHHHHHHHEEEEEEECCCCHHHHCCCCCCCCCCEEEEC PACGMAPFAVTPDELGDGWRDGRVCLDLLVDWNGKRFGAANGGSMEFGFHELVAHAARTR CCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHH DLVAGTVIGSGTVSNTNFREIGSSCIAERRGIEVLDLGEARTPFMAFGDVVRMEAVDGSG HHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCEEEEEECCCCC RAPFGMLEQKAVPA CCCCCHHHHCCCCC >Mature Secondary Structure MRLATLKNGTPDGRLVVVSPDATACAPAPIATLQQAIEQWDAVAPALAVITDFREPLDPQ CEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AVAAPLPRAWQWLDGSAFKSHGDLMDAVLGITKPKTEVPLMYQGMSDTFLPPISEARFPS HHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHCCCCC EDLGIDFEGEFGVIVDAVPMGASAEQAMKHIRLVVQINDWSLRSLAGPEMKTGFGWVQAK HHCCEEECCCCCEEEEECCCCCCHHHHHHHEEEEEEECCCCHHHHCCCCCCCCCCEEEEC PACGMAPFAVTPDELGDGWRDGRVCLDLLVDWNGKRFGAANGGSMEFGFHELVAHAARTR CCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHH DLVAGTVIGSGTVSNTNFREIGSSCIAERRGIEVLDLGEARTPFMAFGDVVRMEAVDGSG HHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCEEEEEECCCCC RAPFGMLEQKAVPA CCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA