Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198679
Identifier: 87198679
GI number: 87198679
Start: 692086
End: 692493
Strand: Direct
Name: 87198679
Synonym: Saro_0655
Alternate gene names: NA
Gene position: 692086-692493 (Clockwise)
Preceding gene: 87198678
Following gene: 87198680
Centisome position: 19.43
GC content: 62.01
Gene sequence:
>408_bases ATGAGTGACGGCGTGGCGACCATGGTGCAGCTGCTCCACGAAAGCGCAGCCGTTACCGGGCTAGTGCCTGCCGGTAGCAT CGGCGCTGGCGTGCTGCCTCTTGGCACGCCTCTGCCTTATCTCTCGCTTTCGCTGGTGTCTTCCAGCGACATGAACATGC CTGCACCCGGGGCGAAGCGGCGTGTGCTGGACAGGGTCCAGGTCACGATTGCCGCGGCGACATATGACGAGCTCCGTGAG ATATCAAAGGCGGTGAAGAGCGCCGGCGCGGATCAAGTCCCTGACGTAGATGGCATCAGCCAGGTCACAGTGCATTCGCT CGGTGCCGGGCCAGACTTCATGGACGAAACGGCCTCGATCTACCTCGGAAGCCGGGATTTCCGGGTCTGGTACAACGAAG TTCGCTGA
Upstream 100 bases:
>100_bases GCCAGCCAAGTGGTCGATGCCATCGGTAGCCGGCTTCGCGAGTATCTGAAGGACAGAACGAGCTTCACGGCGCCGATCAC GATCGAAGCGGACGTCGAAG
Downstream 100 bases:
>100_bases ACAGGAGACCATTGATGAGCAAGAAGAACGCGATCGTCATCCGCAAGCGTGGGGTGAATCACGGCGATGATCACTTTCCG GCCGGCACCGTCATTCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSDGVATMVQLLHESAAVTGLVPAGSIGAGVLPLGTPLPYLSLSLVSSSDMNMPAPGAKRRVLDRVQVTIAAATYDELRE ISKAVKSAGADQVPDVDGISQVTVHSLGAGPDFMDETASIYLGSRDFRVWYNEVR
Sequences:
>Translated_135_residues MSDGVATMVQLLHESAAVTGLVPAGSIGAGVLPLGTPLPYLSLSLVSSSDMNMPAPGAKRRVLDRVQVTIAAATYDELRE ISKAVKSAGADQVPDVDGISQVTVHSLGAGPDFMDETASIYLGSRDFRVWYNEVR >Mature_134_residues SDGVATMVQLLHESAAVTGLVPAGSIGAGVLPLGTPLPYLSLSLVSSSDMNMPAPGAKRRVLDRVQVTIAAATYDELREI SKAVKSAGADQVPDVDGISQVTVHSLGAGPDFMDETASIYLGSRDFRVWYNEVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14174; Mature: 14043
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGVATMVQLLHESAAVTGLVPAGSIGAGVLPLGTPLPYLSLSLVSSSDMNMPAPGAKR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHECCCCCCCCCCCCHHH RVLDRVQVTIAAATYDELREISKAVKSAGADQVPDVDGISQVTVHSLGAGPDFMDETASI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEE YLGSRDFRVWYNEVR EECCCCHHHHHCCCC >Mature Secondary Structure SDGVATMVQLLHESAAVTGLVPAGSIGAGVLPLGTPLPYLSLSLVSSSDMNMPAPGAKR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHECCCCCCCCCCCCHHH RVLDRVQVTIAAATYDELREISKAVKSAGADQVPDVDGISQVTVHSLGAGPDFMDETASI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEE YLGSRDFRVWYNEVR EECCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA