Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198678
Identifier: 87198678
GI number: 87198678
Start: 691488
End: 692093
Strand: Direct
Name: 87198678
Synonym: Saro_0654
Alternate gene names: NA
Gene position: 691488-692093 (Clockwise)
Preceding gene: 87198677
Following gene: 87198679
Centisome position: 19.42
GC content: 62.05
Gene sequence:
>606_bases ATGGCTTTCCTGGAAGCCTTCCCCGCGAGACTGCAGAAAAACGCGCTGAAGTCGGCCATGATCGCTGGTGCGCGCGTGGT TCGTGATGAGGCCAGGGCGAATGTGCCGGTTAAGAGCGGCAAGCTGCGCAAGGCGATCAAGACGAGCAGTCCGCGTGCAT TCAAGGGCGGCGCCGCTTCGGTCAAGGTGAAGGTGCTGGGAGAGCATAGCTTCATCGGACACTTCATTGAGTACGGAGTC AGGCCACACCTGATCACTGCCGGCGACAGCAAGCTGACCGTCCGGACGCTCAACAAGCGTGCCAGCAGGGGCGAGGGCAT TCGCGAGACAGAAACCGGTCTGATCAGGGTGGGCGGCTACGAGGGCACCCGCACGACCCAGACGAGCGACGGACCGCGCG AGGACACATTCAAGATCAATGCCGCGTTCATAAGGGGGGCGATCGTTCACCCTGGCTTTCCGGCGCATCCCTTCCTCCGC CCTGCGCTGGACAGAACGGCCAGCCAAGTGGTCGATGCCATCGGTAGCCGGCTTCGCGAGTATCTGAAGGACAGAACGAG CTTCACGGCGCCGATCACGATCGAAGCGGACGTCGAAGATGAGTGA
Upstream 100 bases:
>100_bases TGGGCCGGCGTGAAGTGCTCGAGATTGCGGCAGAAGAATTGTCGACGGAAGGGCAGGATTCGTGAGCCGTAACATCGGAT TGAAAGGTGGGCCGGAACTC
Downstream 100 bases:
>100_bases CGGCGTGGCGACCATGGTGCAGCTGCTCCACGAAAGCGCAGCCGTTACCGGGCTAGTGCCTGCCGGTAGCATCGGCGCTG GCGTGCTGCCTCTTGGCACG
Product: Phage protein, HK97, gp10
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAFLEAFPARLQKNALKSAMIAGARVVRDEARANVPVKSGKLRKAIKTSSPRAFKGGAASVKVKVLGEHSFIGHFIEYGV RPHLITAGDSKLTVRTLNKRASRGEGIRETETGLIRVGGYEGTRTTQTSDGPREDTFKINAAFIRGAIVHPGFPAHPFLR PALDRTASQVVDAIGSRLREYLKDRTSFTAPITIEADVEDE
Sequences:
>Translated_201_residues MAFLEAFPARLQKNALKSAMIAGARVVRDEARANVPVKSGKLRKAIKTSSPRAFKGGAASVKVKVLGEHSFIGHFIEYGV RPHLITAGDSKLTVRTLNKRASRGEGIRETETGLIRVGGYEGTRTTQTSDGPREDTFKINAAFIRGAIVHPGFPAHPFLR PALDRTASQVVDAIGSRLREYLKDRTSFTAPITIEADVEDE >Mature_200_residues AFLEAFPARLQKNALKSAMIAGARVVRDEARANVPVKSGKLRKAIKTSSPRAFKGGAASVKVKVLGEHSFIGHFIEYGVR PHLITAGDSKLTVRTLNKRASRGEGIRETETGLIRVGGYEGTRTTQTSDGPREDTFKINAAFIRGAIVHPGFPAHPFLRP ALDRTASQVVDAIGSRLREYLKDRTSFTAPITIEADVEDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21868; Mature: 21737
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLEAFPARLQKNALKSAMIAGARVVRDEARANVPVKSGKLRKAIKTSSPRAFKGGAAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCE VKVKVLGEHSFIGHFIEYGVRPHLITAGDSKLTVRTLNKRASRGEGIRETETGLIRVGGY EEEEEECCCHHHHHHHHHCCCCEEEECCCCEEEEEEHHHHHHCCCCCCCCCCCEEEECCC EGTRTTQTSDGPREDTFKINAAFIRGAIVHPGFPAHPFLRPALDRTASQVVDAIGSRLRE CCCCCCCCCCCCCCCEEEEEHHHEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YLKDRTSFTAPITIEADVEDE HHHHHCCCCCCEEEEECCCCC >Mature Secondary Structure AFLEAFPARLQKNALKSAMIAGARVVRDEARANVPVKSGKLRKAIKTSSPRAFKGGAAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCE VKVKVLGEHSFIGHFIEYGVRPHLITAGDSKLTVRTLNKRASRGEGIRETETGLIRVGGY EEEEEECCCHHHHHHHHHCCCCEEEECCCCEEEEEEHHHHHHCCCCCCCCCCCEEEECCC EGTRTTQTSDGPREDTFKINAAFIRGAIVHPGFPAHPFLRPALDRTASQVVDAIGSRLRE CCCCCCCCCCCCCCCEEEEEHHHEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YLKDRTSFTAPITIEADVEDE HHHHHCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA