Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198662
Identifier: 87198662
GI number: 87198662
Start: 677597
End: 677956
Strand: Direct
Name: 87198662
Synonym: Saro_0638
Alternate gene names: NA
Gene position: 677597-677956 (Clockwise)
Preceding gene: 87198661
Following gene: 87198663
Centisome position: 19.03
GC content: 65.28
Gene sequence:
>360_bases GTGAGCAATGATAGGAAGGCGCTTGCCGCTGCAGTGCGCGCGCGGGTTTCAGGTTTGCTGGGCGACGGAGTCCATAGCGG CGCGGTGGTTTCCACCGCAGTCGACATGGTTGCCGAATTGGCAGCCATGGGCGGGGTGTCGCCGATCGAAGCGGTTGTCA TGGGCCGCATCCAGGAGCGAGCGGATATCCTTGCCTTCCTTGCTGGGCGGCGGACCGCGGCGCTGACGATCGCGGACAAG CACCCGGAGATGGGCGAGGGAGCGGATACCCATGCCCGCGCCAAATGGGCGGCCGAGCAGATCGCCATCGAGATCGAAGC CTTCGAGCAGGGTCTTCATGAAGGGAGGGCTGCGCAGTGA
Upstream 100 bases:
>100_bases GGCTGGTCGAACTGCACCACGTGGGTGCCGGCAATGCGCAGCGGCGCGCGAAGATCGTGGAAACGGGCCGGTGGACGGCG GACATCAAGGAGAACGGGCG
Downstream 100 bases:
>100_bases TCGCAACCGACAAGCGCAAGCCCGCCTTCCGGATTGCGGCGAAGGCTATGGCCAAGGCATTGGCCGACGTCGTGGAAGTG ACACCGGCGGGCGGGAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSNDRKALAAAVRARVSGLLGDGVHSGAVVSTAVDMVAELAAMGGVSPIEAVVMGRIQERADILAFLAGRRTAALTIADK HPEMGEGADTHARAKWAAEQIAIEIEAFEQGLHEGRAAQ
Sequences:
>Translated_119_residues MSNDRKALAAAVRARVSGLLGDGVHSGAVVSTAVDMVAELAAMGGVSPIEAVVMGRIQERADILAFLAGRRTAALTIADK HPEMGEGADTHARAKWAAEQIAIEIEAFEQGLHEGRAAQ >Mature_118_residues SNDRKALAAAVRARVSGLLGDGVHSGAVVSTAVDMVAELAAMGGVSPIEAVVMGRIQERADILAFLAGRRTAALTIADKH PEMGEGADTHARAKWAAEQIAIEIEAFEQGLHEGRAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12357; Mature: 12226
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDRKALAAAVRARVSGLLGDGVHSGAVVSTAVDMVAELAAMGGVSPIEAVVMGRIQER CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ADILAFLAGRRTAALTIADKHPEMGEGADTHARAKWAAEQIAIEIEAFEQGLHEGRAAQ HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SNDRKALAAAVRARVSGLLGDGVHSGAVVSTAVDMVAELAAMGGVSPIEAVVMGRIQER CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ADILAFLAGRRTAALTIADKHPEMGEGADTHARAKWAAEQIAIEIEAFEQGLHEGRAAQ HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA