Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198625
Identifier: 87198625
GI number: 87198625
Start: 645976
End: 647553
Strand: Direct
Name: 87198625
Synonym: Saro_0601
Alternate gene names: NA
Gene position: 645976-647553 (Clockwise)
Preceding gene: 87198624
Following gene: 87198626
Centisome position: 18.14
GC content: 68.95
Gene sequence:
>1578_bases ATGACGACAGCGCCTTCCGGACTGGTCGACGCCGCCCGCGGTGCCCTTGTCCGGGGCGATCTGGAAGCGACGAATCGCGC CGCCGCCGCGATGGTGGCGGCAAGTCCCGGGGACGCCGAAGGCCACTTTCTGCTGGGGGTGGCCGAAGCCGGTGTCGGGC GTATCAAGGCGGGCATCGGGCACATCGAGCGGGCGGTGACGCTCGATCCGAGAGGCGAATACCTCGCGCACCTCGCCAAG TTCTATTGCCTTGTGCGCAGGGACCGCGACGCAGCGAACGCGCTGCGCAGGGCCGAGGCCGCACCGCCCGCCGACGCGCT GGGCCGCGATACGATGGGCTGCGTCTTTGCCCGGCTCGGCGACCATGCTGCCGCGCTTCCCCATTTCGCCGAGGCCGTGC GGCTGCGCCCCGACATTGCCGAATATCGCTACAACGAGGCGGTTACCCTGAACTTCCTCGGCCGCGTCGATGAGGCCGAG GCGGCCATCGAGGCGCTGCTGGCGCAAGCGCCCGGCCATGCGCGCGCGCATCACCTGCTGGCGGGCCTGCGCCGACAGAG CGCTGAGCGCAACCACGTGGCGCGGCTTGGCCAGGCAAGGGCTCGGGCCCGGGGCGGGCGTGACCGGCTCCTGCTGGGCT ATGCGCTGGCCAAGGAACTGGAGGACATCGGCGAATACGACCACGCTCTCGACACGCTGTGCGAGGCCAATGCCGAACAC CGGCGCAACCTGCCCTATGCGTTCGAGCGCGACGCCGCGATCTTCGATGCGATCGAGGAAAGCTGGCCGATGTTGCGCGA TGCGGCACCGACGGCGCCGAGCAAGGCGTCCCCGATCTTCGTCATCGGCATGCCCCGCACCGGCACGACGCTGGTCGATC GCATCCTCGGTTCGCACCCCGAAGTCGAAAGCGCGGGCGAGTTGCAGGCAATGCCGCTGGCGGTGAAGAGGGCGGCGGCG ACCAACAGCGCGACGGTCATGGACCCGGAAACGATCCGCGCGGCCACCGGAGCCGACATGGCGGCGGTCGGTCGGGATTA TCTGGAGCGTGCCCGCCACCATCTGCGCGGCGGGGCTGCGCGCTTTACCGACAAGTTTCCCGGCAACTTCCACTATGCGG GCTTCATTGCCCGTGCCCTGCCCGAAGCGCGGATCGTCTGCCTGCGGCGTCATCCGATGGACACGGTGCTGAGCAATTTC CGCAACCTCTTCGCGGTCGGCTCGCGGTACTACGACTACAGCTACGACCTGCTCGACATAGCGGCCTATTATGCCCGGTT CGACCGCCTGATGGCGTTCTGGCGCGAGGCGCTGCCCGGGCGCGTGCTGGAGCTGCGCTACGAGGATCTGGTCGCGGACC AGGAAGGGCAGACCCGGCGGCTTCTGGAGCACTGCGGGCTCGGCTGGTCGGAAACATGCCTGGAATTCCACAGCAACGCC GCGCCGGTTTCGACGCCGAGCGCGGCGCAGGTCCGCCGTCCGATCTACGCCGATTCCGTCGCGCGCTGGAAGCGGCATGG AGAGGTGCTGGGGCCTGTCGCGCGCTTCTTCGAGCAGACCGGCATCGCGATCGATTGA
Upstream 100 bases:
>100_bases AACAGACGCTGTTTCCGTTCCAGCCGCTGATCGACCGCTTCAAGGCGCGGAGACGAGAGCGCGACGGGGCGGCGGGCGAT GCCGGAGGCCCAGCCGCCGC
Downstream 100 bases:
>100_bases AGGGAGTGCAACGGGCATGCCACGACTTTTCCTGTTTTTCGCGGTCGCAATCGGGGCGGGGCTGGTCCAGCCGGCGCTTG CGGTCGAGGAACCTGCGGCG
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MTTAPSGLVDAARGALVRGDLEATNRAAAAMVAASPGDAEGHFLLGVAEAGVGRIKAGIGHIERAVTLDPRGEYLAHLAK FYCLVRRDRDAANALRRAEAAPPADALGRDTMGCVFARLGDHAAALPHFAEAVRLRPDIAEYRYNEAVTLNFLGRVDEAE AAIEALLAQAPGHARAHHLLAGLRRQSAERNHVARLGQARARARGGRDRLLLGYALAKELEDIGEYDHALDTLCEANAEH RRNLPYAFERDAAIFDAIEESWPMLRDAAPTAPSKASPIFVIGMPRTGTTLVDRILGSHPEVESAGELQAMPLAVKRAAA TNSATVMDPETIRAATGADMAAVGRDYLERARHHLRGGAARFTDKFPGNFHYAGFIARALPEARIVCLRRHPMDTVLSNF RNLFAVGSRYYDYSYDLLDIAAYYARFDRLMAFWREALPGRVLELRYEDLVADQEGQTRRLLEHCGLGWSETCLEFHSNA APVSTPSAAQVRRPIYADSVARWKRHGEVLGPVARFFEQTGIAID
Sequences:
>Translated_525_residues MTTAPSGLVDAARGALVRGDLEATNRAAAAMVAASPGDAEGHFLLGVAEAGVGRIKAGIGHIERAVTLDPRGEYLAHLAK FYCLVRRDRDAANALRRAEAAPPADALGRDTMGCVFARLGDHAAALPHFAEAVRLRPDIAEYRYNEAVTLNFLGRVDEAE AAIEALLAQAPGHARAHHLLAGLRRQSAERNHVARLGQARARARGGRDRLLLGYALAKELEDIGEYDHALDTLCEANAEH RRNLPYAFERDAAIFDAIEESWPMLRDAAPTAPSKASPIFVIGMPRTGTTLVDRILGSHPEVESAGELQAMPLAVKRAAA TNSATVMDPETIRAATGADMAAVGRDYLERARHHLRGGAARFTDKFPGNFHYAGFIARALPEARIVCLRRHPMDTVLSNF RNLFAVGSRYYDYSYDLLDIAAYYARFDRLMAFWREALPGRVLELRYEDLVADQEGQTRRLLEHCGLGWSETCLEFHSNA APVSTPSAAQVRRPIYADSVARWKRHGEVLGPVARFFEQTGIAID >Mature_524_residues TTAPSGLVDAARGALVRGDLEATNRAAAAMVAASPGDAEGHFLLGVAEAGVGRIKAGIGHIERAVTLDPRGEYLAHLAKF YCLVRRDRDAANALRRAEAAPPADALGRDTMGCVFARLGDHAAALPHFAEAVRLRPDIAEYRYNEAVTLNFLGRVDEAEA AIEALLAQAPGHARAHHLLAGLRRQSAERNHVARLGQARARARGGRDRLLLGYALAKELEDIGEYDHALDTLCEANAEHR RNLPYAFERDAAIFDAIEESWPMLRDAAPTAPSKASPIFVIGMPRTGTTLVDRILGSHPEVESAGELQAMPLAVKRAAAT NSATVMDPETIRAATGADMAAVGRDYLERARHHLRGGAARFTDKFPGNFHYAGFIARALPEARIVCLRRHPMDTVLSNFR NLFAVGSRYYDYSYDLLDIAAYYARFDRLMAFWREALPGRVLELRYEDLVADQEGQTRRLLEHCGLGWSETCLEFHSNAA PVSTPSAAQVRRPIYADSVARWKRHGEVLGPVARFFEQTGIAID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 57428; Mature: 57296
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPSGLVDAARGALVRGDLEATNRAAAAMVAASPGDAEGHFLLGVAEAGVGRIKAGIG CCCCCCCHHHHHCCCEEECCHHHHHHHHHHEEECCCCCCCCCEEEEEHHCCHHHHHHHHH HIERAVTLDPRGEYLAHLAKFYCLVRRDRDAANALRRAEAAPPADALGRDTMGCVFARLG HHHHEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHC DHAAALPHFAEAVRLRPDIAEYRYNEAVTLNFLGRVDEAEAAIEALLAQAPGHARAHHLL CHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH AGLRRQSAERNHVARLGQARARARGGRDRLLLGYALAKELEDIGEYDHALDTLCEANAEH HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RRNLPYAFERDAAIFDAIEESWPMLRDAAPTAPSKASPIFVIGMPRTGTTLVDRILGSHP HCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCC EVESAGELQAMPLAVKRAAATNSATVMDPETIRAATGADMAAVGRDYLERARHHLRGGAA CCCCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHH RFTDKFPGNFHYAGFIARALPEARIVCLRRHPMDTVLSNFRNLFAVGSRYYDYSYDLLDI HHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHH AAYYARFDRLMAFWREALPGRVLELRYEDLVADQEGQTRRLLEHCGLGWSETCLEFHSNA HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCC APVSTPSAAQVRRPIYADSVARWKRHGEVLGPVARFFEQTGIAID CCCCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTAPSGLVDAARGALVRGDLEATNRAAAAMVAASPGDAEGHFLLGVAEAGVGRIKAGIG CCCCCCHHHHHCCCEEECCHHHHHHHHHHEEECCCCCCCCCEEEEEHHCCHHHHHHHHH HIERAVTLDPRGEYLAHLAKFYCLVRRDRDAANALRRAEAAPPADALGRDTMGCVFARLG HHHHEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHC DHAAALPHFAEAVRLRPDIAEYRYNEAVTLNFLGRVDEAEAAIEALLAQAPGHARAHHLL CHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH AGLRRQSAERNHVARLGQARARARGGRDRLLLGYALAKELEDIGEYDHALDTLCEANAEH HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RRNLPYAFERDAAIFDAIEESWPMLRDAAPTAPSKASPIFVIGMPRTGTTLVDRILGSHP HCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCC EVESAGELQAMPLAVKRAAATNSATVMDPETIRAATGADMAAVGRDYLERARHHLRGGAA CCCCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHH RFTDKFPGNFHYAGFIARALPEARIVCLRRHPMDTVLSNFRNLFAVGSRYYDYSYDLLDI HHCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHH AAYYARFDRLMAFWREALPGRVLELRYEDLVADQEGQTRRLLEHCGLGWSETCLEFHSNA HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCC APVSTPSAAQVRRPIYADSVARWKRHGEVLGPVARFFEQTGIAID CCCCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]