Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198626
Identifier: 87198626
GI number: 87198626
Start: 647570
End: 647929
Strand: Direct
Name: 87198626
Synonym: Saro_0602
Alternate gene names: NA
Gene position: 647570-647929 (Clockwise)
Preceding gene: 87198625
Following gene: 87198627
Centisome position: 18.18
GC content: 66.67
Gene sequence:
>360_bases ATGCCACGACTTTTCCTGTTTTTCGCGGTCGCAATCGGGGCGGGGCTGGTCCAGCCGGCGCTTGCGGTCGAGGAACCTGC GGCGCGGGTGGCGAAGTGCGGGACGACAAGCTGCCTGATCGTTTCTGGGCGTCGTGCCGACGAGGCCTTGCCGGTGCGGG TCAACGGACACGAGGTTCAGGCTGAGGGCGGGCGGCGGTGGCGTGTCCGGGTGCCGGTCGCAACGGTCCGCGCATGGTCC GAACCTCTTGCGCGGACGATAGCGGTTTCGGTCGGGGAGACCTGGCAGGAAGTGGCGTTGCCTATCGGACTGCTTGGCCA TTCGCACGATCTGGCGATGCTGGTGGTCCGGGTGAAGTAA
Upstream 100 bases:
>100_bases TCCGTCGCGCGCTGGAAGCGGCATGGAGAGGTGCTGGGGCCTGTCGCGCGCTTCTTCGAGCAGACCGGCATCGCGATCGA TTGAAGGGAGTGCAACGGGC
Downstream 100 bases:
>100_bases TAACTGGAGCTGAGCAAAGTAATAAAACAACAAATTTGAGTCGAATATTGAAAGTTTCCTTTCCTGACGCTATGTAAGCG GCAGCCGCCGGAGAGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPRLFLFFAVAIGAGLVQPALAVEEPAARVAKCGTTSCLIVSGRRADEALPVRVNGHEVQAEGGRRWRVRVPVATVRAWS EPLARTIAVSVGETWQEVALPIGLLGHSHDLAMLVVRVK
Sequences:
>Translated_119_residues MPRLFLFFAVAIGAGLVQPALAVEEPAARVAKCGTTSCLIVSGRRADEALPVRVNGHEVQAEGGRRWRVRVPVATVRAWS EPLARTIAVSVGETWQEVALPIGLLGHSHDLAMLVVRVK >Mature_118_residues PRLFLFFAVAIGAGLVQPALAVEEPAARVAKCGTTSCLIVSGRRADEALPVRVNGHEVQAEGGRRWRVRVPVATVRAWSE PLARTIAVSVGETWQEVALPIGLLGHSHDLAMLVVRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12785; Mature: 12654
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLFLFFAVAIGAGLVQPALAVEEPAARVAKCGTTSCLIVSGRRADEALPVRVNGHEVQ CCHHHHHHHHHHCCHHCCCHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCEEEECCEEEE AEGGRRWRVRVPVATVRAWSEPLARTIAVSVGETWQEVALPIGLLGHSHDLAMLVVRVK ECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEC >Mature Secondary Structure PRLFLFFAVAIGAGLVQPALAVEEPAARVAKCGTTSCLIVSGRRADEALPVRVNGHEVQ CHHHHHHHHHHCCHHCCCHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCEEEECCEEEE AEGGRRWRVRVPVATVRAWSEPLARTIAVSVGETWQEVALPIGLLGHSHDLAMLVVRVK ECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA