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The map label for this gene is ydgJ [C]

Identifier: 87198477

GI number: 87198477

Start: 494678

End: 495793

Strand: Direct

Name: ydgJ [C]

Synonym: Saro_0452

Alternate gene names: 87198477

Gene position: 494678-495793 (Clockwise)

Preceding gene: 87198475

Following gene: 87198478

Centisome position: 13.89

GC content: 67.56

Gene sequence:

>1116_bases
ATGCGACGTTTGCGAATGGGGATGATCGGCGGTGGGCCGGGGGCGTTCATCGGCCCCGTGCACCGCTTTGCGGCGGAACT
CGACCGCGAGATCGAACTGGTGGCTGGCGTTTTCTCCAGCGATGCAGGCCGCAGCGCGGCCGCGGGCGAGAGCTACCGGA
TCGATTCGGCGCGCGCCTATCCCTCGCTCGAAGCGATGTTTGCCGGCGAGGCCGCCCGCGACGATGGCATCGATTTCGTT
TCCATCGTCACGCCCAATCACAATCACCTGCCCTCGGCGCGCGCGGCGCTCGCGGCGGGCTATCCGGTCATCACGGACAA
GCCGCTGACCGCCACTCTCGACGAGGCGCACCAGCTTGCCGGGGTCGTCGCTGCCGCAGGCAAGCCGTTCGGCGTGACCT
ATACCTATTCCGGCTATCCCCTTGTCCGCGAGGCGCGCGCCCGCGTTGCCGCAGGAGAGATCGGCACCGTGCGCAAGGTC
GTGGTCGAGTATCCGCAGGGCTGGCTTGCGGGACCGGCCGAAGGCAAGCAGGCCGAATGGCGGGTCGATCCCGCGCGCGC
CGGGCTTGGCGGCTGCATCGGCGACATCGGCGTCCATGCCTTTCAGCTTGCGGAATTCGTCACCGGCCTGCGCGTGACCG
AACTCCTCGCCGATCTCGGCTCGGTCGTCCCTGGGCGCCTGCTCGACGACGATTGCTCGATCCTTCTGCGCTTCGAAAAC
GGCGCGCGCGGCGTTCTGCTCGCCAGCCAGATCGAAGTGGGTGAACTCAACGGCCTGCGCATTCGCGCCTATGGCGACAT
GGGCGGCATTGTCTGGCGGCAGGAGGAGCCCAACACGCTCACCATCAGCCGCCTCGACGGCACATGCACGCTGGTCCGTT
CCGGCACCGGTGTGCTCGGCGCCGACGCAGCCTCGCGGACCCGTACCCCAGGTGGACATCCGGAGGGTTATCTCGAAGCC
TTTGCAAATCTTTACCGCGACTTCGCGGCCATCGTCCGAGGTGACGCCGCGCCGCTCCTGCCCGGTATCGCAGAGGGCGT
GCGCGGCATGACCTTCATCCACAAGGCCGTTACCGCCAGCCGCGAGAATGCCGGCTGGGTCAAGCTCGAAGACTGA

Upstream 100 bases:

>100_bases
CAAAAATGTCACCTCCGGATGCTTCGCGCGGGTTGACCGCCGCGAATTCTAAAATAGAATTATCCTTCTAAATGACAGCG
ATGTCCGTGGGAGTTTCTGG

Downstream 100 bases:

>100_bases
GGAGAGCCGATATGAAGACCATCAAGGGCCCGGGCATCTTCCTCGCCCAGTTCGCCGGCGACAGCGCGCCGTTCAACAGC
CTCGAGACCATCGCCGACTG

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRRLRMGMIGGGPGAFIGPVHRFAAELDREIELVAGVFSSDAGRSAAAGESYRIDSARAYPSLEAMFAGEAARDDGIDFV
SIVTPNHNHLPSARAALAAGYPVITDKPLTATLDEAHQLAGVVAAAGKPFGVTYTYSGYPLVREARARVAAGEIGTVRKV
VVEYPQGWLAGPAEGKQAEWRVDPARAGLGGCIGDIGVHAFQLAEFVTGLRVTELLADLGSVVPGRLLDDDCSILLRFEN
GARGVLLASQIEVGELNGLRIRAYGDMGGIVWRQEEPNTLTISRLDGTCTLVRSGTGVLGADAASRTRTPGGHPEGYLEA
FANLYRDFAAIVRGDAAPLLPGIAEGVRGMTFIHKAVTASRENAGWVKLED

Sequences:

>Translated_371_residues
MRRLRMGMIGGGPGAFIGPVHRFAAELDREIELVAGVFSSDAGRSAAAGESYRIDSARAYPSLEAMFAGEAARDDGIDFV
SIVTPNHNHLPSARAALAAGYPVITDKPLTATLDEAHQLAGVVAAAGKPFGVTYTYSGYPLVREARARVAAGEIGTVRKV
VVEYPQGWLAGPAEGKQAEWRVDPARAGLGGCIGDIGVHAFQLAEFVTGLRVTELLADLGSVVPGRLLDDDCSILLRFEN
GARGVLLASQIEVGELNGLRIRAYGDMGGIVWRQEEPNTLTISRLDGTCTLVRSGTGVLGADAASRTRTPGGHPEGYLEA
FANLYRDFAAIVRGDAAPLLPGIAEGVRGMTFIHKAVTASRENAGWVKLED
>Mature_371_residues
MRRLRMGMIGGGPGAFIGPVHRFAAELDREIELVAGVFSSDAGRSAAAGESYRIDSARAYPSLEAMFAGEAARDDGIDFV
SIVTPNHNHLPSARAALAAGYPVITDKPLTATLDEAHQLAGVVAAAGKPFGVTYTYSGYPLVREARARVAAGEIGTVRKV
VVEYPQGWLAGPAEGKQAEWRVDPARAGLGGCIGDIGVHAFQLAEFVTGLRVTELLADLGSVVPGRLLDDDCSILLRFEN
GARGVLLASQIEVGELNGLRIRAYGDMGGIVWRQEEPNTLTISRLDGTCTLVRSGTGVLGADAASRTRTPGGHPEGYLEA
FANLYRDFAAIVRGDAAPLLPGIAEGVRGMTFIHKAVTASRENAGWVKLED

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39122; Mature: 39122

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLRMGMIGGGPGAFIGPVHRFAAELDREIELVAGVFSSDAGRSAAAGESYRIDSARAY
CCCEEEEEECCCCCCHHHHHHHHHHHHCCHHEEHHHHHCCCCCCCCCCCCCEECCCCCCC
PSLEAMFAGEAARDDGIDFVSIVTPNHNHLPSARAALAAGYPVITDKPLTATLDEAHQLA
CCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCEECCCCCCHHHHHHHHHH
GVVAAAGKPFGVTYTYSGYPLVREARARVAAGEIGTVRKVVVEYPQGWLAGPAEGKQAEW
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEE
RVDPARAGLGGCIGDIGVHAFQLAEFVTGLRVTELLADLGSVVPGRLLDDDCSILLRFEN
EECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECC
GARGVLLASQIEVGELNGLRIRAYGDMGGIVWRQEEPNTLTISRLDGTCTLVRSGTGVLG
CCCEEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEE
ADAASRTRTPGGHPEGYLEAFANLYRDFAAIVRGDAAPLLPGIAEGVRGMTFIHKAVTAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
RENAGWVKLED
CCCCCCEEECC
>Mature Secondary Structure
MRRLRMGMIGGGPGAFIGPVHRFAAELDREIELVAGVFSSDAGRSAAAGESYRIDSARAY
CCCEEEEEECCCCCCHHHHHHHHHHHHCCHHEEHHHHHCCCCCCCCCCCCCEECCCCCCC
PSLEAMFAGEAARDDGIDFVSIVTPNHNHLPSARAALAAGYPVITDKPLTATLDEAHQLA
CCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCEECCCCCCHHHHHHHHHH
GVVAAAGKPFGVTYTYSGYPLVREARARVAAGEIGTVRKVVVEYPQGWLAGPAEGKQAEW
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEE
RVDPARAGLGGCIGDIGVHAFQLAEFVTGLRVTELLADLGSVVPGRLLDDDCSILLRFEN
EECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECC
GARGVLLASQIEVGELNGLRIRAYGDMGGIVWRQEEPNTLTISRLDGTCTLVRSGTGVLG
CCCEEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCEEEEEECCCCEEE
ADAASRTRTPGGHPEGYLEAFANLYRDFAAIVRGDAAPLLPGIAEGVRGMTFIHKAVTAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
RENAGWVKLED
CCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]