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The map label for this gene is 87198478

Identifier: 87198478

GI number: 87198478

Start: 495805

End: 496860

Strand: Direct

Name: 87198478

Synonym: Saro_0453

Alternate gene names: NA

Gene position: 495805-496860 (Clockwise)

Preceding gene: 87198477

Following gene: 87198479

Centisome position: 13.92

GC content: 65.44

Gene sequence:

>1056_bases
ATGAAGACCATCAAGGGCCCGGGCATCTTCCTCGCCCAGTTCGCCGGCGACAGCGCGCCGTTCAACAGCCTCGAGACCAT
CGCCGACTGGGCCGCCGGCCTCGGCTACAAGGGCGTCCAGATCCCGAGCTGGGACGGTCGCCTGTTCGACCTCGAAAAGG
CCGCGACCAGCAAGGATTACTGCGACGAGGTCAAGGGCATGCTGGCGGCCAAGGGCATCGAGATCACCGAGCTGTCGACT
CACCTGCAGGGCCAGCTCGTGGCCGTGCACCCTGCCTTCGACGCGCAGTTCGACGGATTTGCTCCTGCCTCGGTCCACGG
CAATCCCGCCGCGCGGCAGCAATGGGCGGTACAACAGCTCAAGTTCGCGGCCCAGGCCAGCCGCAACCTCGGCCTCGCCG
CCCATGCCTCGTTCTCGGGCGCTTTCGCATGGCCCTACTTCTATCCCTGGCCGGCGCGTCCGGCCGGATTGGTCGAGGAT
GCCTTCGATGAGTTGGCGCGGCGCTGGAAGCCGATCCTCGACGTCTTCGACGAGAACGGCGTCGACGTTGCCTACGAGAT
CCATCCGGGCGAGGACCTGCACGACGGGGTGACCTTCGAGATGTTCCTCGAACGCGTCGGCAATCACCCGCGCGCGAACA
TCCTCTACGATCCGAGCCACTTCGTGCTGCAGCAGCTCGATTACCTGGCGTTCATCGACATCTACCACGAGCGCATCAAG
TGCTTCCACGTGAAGGACGCCGAGTTCCGCCCCAACGGTCGCTCGGGCGTCTATGGTGGCTACCAGTCCTGGGTGGACCG
GCCGGGCCGCTTCCGCAGCCTGGGTGACGGTCAGGTCGATTTCGCCGCGATTTTCAGCAAGATGGCCGCCAACGACTATG
CCGGCTGGGCCGTTCTCGAATGGGAATGCGCGCTCAAGCATCCCGAGGTCGGCGCGGCCGAAGGCGCGCCCTTCATAGAT
CGCCACATCATCAGGGTCACCGAACACGCCTTCGACGATTTCGCCGCGGGCGGAGCTGACCGGGCGCTCAACGCAAGGCT
CATGGGCATCGGCTGA

Upstream 100 bases:

>100_bases
TCGCAGAGGGCGTGCGCGGCATGACCTTCATCCACAAGGCCGTTACCGCCAGCCGCGAGAATGCCGGCTGGGTCAAGCTC
GAAGACTGAGGAGAGCCGAT

Downstream 100 bases:

>100_bases
GCGGCCGGTTCATCGCAGCGCGCCAATCGCCGGCGGAGCCCTGCTCCGCCGGCTTTTTCGTGCCTGAGTCCAGCAATCCA
TTTACCACGTTGATGATTAT

Product: xylose isomerase-like TIM barrel domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase-Like TIM Barrel; Xylose Isomerase-Like Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain Protein Tim Barrel; Iole Protein; AP Endonuclease; Endonuclease IV; Apurinic/Apyrimidinic Endonuclease; Endonuclease; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Inosose Dehydratase; IolE-Like Protein; IolE Protein; Xylose Isomerase-Like; Xylose Isomerase-Like TIM Barrel Family Protein; AP Endonuclease Family 2 C Terminus Family; Xylose Isomerase/Endonuclease Family Protein; Sugar Phosphate Isomerase/Epimerase IolE; Xlose Isomerase Domain-Containing Protein

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKTIKGPGIFLAQFAGDSAPFNSLETIADWAAGLGYKGVQIPSWDGRLFDLEKAATSKDYCDEVKGMLAAKGIEITELST
HLQGQLVAVHPAFDAQFDGFAPASVHGNPAARQQWAVQQLKFAAQASRNLGLAAHASFSGAFAWPYFYPWPARPAGLVED
AFDELARRWKPILDVFDENGVDVAYEIHPGEDLHDGVTFEMFLERVGNHPRANILYDPSHFVLQQLDYLAFIDIYHERIK
CFHVKDAEFRPNGRSGVYGGYQSWVDRPGRFRSLGDGQVDFAAIFSKMAANDYAGWAVLEWECALKHPEVGAAEGAPFID
RHIIRVTEHAFDDFAAGGADRALNARLMGIG

Sequences:

>Translated_351_residues
MKTIKGPGIFLAQFAGDSAPFNSLETIADWAAGLGYKGVQIPSWDGRLFDLEKAATSKDYCDEVKGMLAAKGIEITELST
HLQGQLVAVHPAFDAQFDGFAPASVHGNPAARQQWAVQQLKFAAQASRNLGLAAHASFSGAFAWPYFYPWPARPAGLVED
AFDELARRWKPILDVFDENGVDVAYEIHPGEDLHDGVTFEMFLERVGNHPRANILYDPSHFVLQQLDYLAFIDIYHERIK
CFHVKDAEFRPNGRSGVYGGYQSWVDRPGRFRSLGDGQVDFAAIFSKMAANDYAGWAVLEWECALKHPEVGAAEGAPFID
RHIIRVTEHAFDDFAAGGADRALNARLMGIG
>Mature_351_residues
MKTIKGPGIFLAQFAGDSAPFNSLETIADWAAGLGYKGVQIPSWDGRLFDLEKAATSKDYCDEVKGMLAAKGIEITELST
HLQGQLVAVHPAFDAQFDGFAPASVHGNPAARQQWAVQQLKFAAQASRNLGLAAHASFSGAFAWPYFYPWPARPAGLVED
AFDELARRWKPILDVFDENGVDVAYEIHPGEDLHDGVTFEMFLERVGNHPRANILYDPSHFVLQQLDYLAFIDIYHERIK
CFHVKDAEFRPNGRSGVYGGYQSWVDRPGRFRSLGDGQVDFAAIFSKMAANDYAGWAVLEWECALKHPEVGAAEGAPFID
RHIIRVTEHAFDDFAAGGADRALNARLMGIG

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38736; Mature: 38736

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIKGPGIFLAQFAGDSAPFNSLETIADWAAGLGYKGVQIPSWDGRLFDLEKAATSKDY
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHCCHHH
CDEVKGMLAAKGIEITELSTHLQGQLVAVHPAFDAQFDGFAPASVHGNPAARQQWAVQQL
HHHHHHHHHHCCCEEEEHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KFAAQASRNLGLAAHASFSGAFAWPYFYPWPARPAGLVEDAFDELARRWKPILDVFDENG
HHHHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VDVAYEIHPGEDLHDGVTFEMFLERVGNHPRANILYDPSHFVLQQLDYLAFIDIYHERIK
CEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEE
CFHVKDAEFRPNGRSGVYGGYQSWVDRPGRFRSLGDGQVDFAAIFSKMAANDYAGWAVLE
EEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEE
WECALKHPEVGAAEGAPFIDRHIIRVTEHAFDDFAAGGADRALNARLMGIG
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
>Mature Secondary Structure
MKTIKGPGIFLAQFAGDSAPFNSLETIADWAAGLGYKGVQIPSWDGRLFDLEKAATSKDY
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHCCHHH
CDEVKGMLAAKGIEITELSTHLQGQLVAVHPAFDAQFDGFAPASVHGNPAARQQWAVQQL
HHHHHHHHHHCCCEEEEHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KFAAQASRNLGLAAHASFSGAFAWPYFYPWPARPAGLVEDAFDELARRWKPILDVFDENG
HHHHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VDVAYEIHPGEDLHDGVTFEMFLERVGNHPRANILYDPSHFVLQQLDYLAFIDIYHERIK
CEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEE
CFHVKDAEFRPNGRSGVYGGYQSWVDRPGRFRSLGDGQVDFAAIFSKMAANDYAGWAVLE
EEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEE
WECALKHPEVGAAEGAPFIDRHIIRVTEHAFDDFAAGGADRALNARLMGIG
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA