Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198382
Identifier: 87198382
GI number: 87198382
Start: 393322
End: 394233
Strand: Direct
Name: 87198382
Synonym: Saro_0357
Alternate gene names: NA
Gene position: 393322-394233 (Clockwise)
Preceding gene: 87198381
Following gene: 87198383
Centisome position: 11.04
GC content: 58.88
Gene sequence:
>912_bases ATGACAGATAGCTTTGCCAAACCTGCGCTGACAATCGACCAACAGATAGCGCATCTGCGCGGCAAAGGCATGGCCATCGA GGACGAAGCCCGGGCGCGATACTGGCTTACCCATGTCAGCTATTACCGGCTCAGCGCCTATTGGCTCTATTTTGAACATC CTAAAGGGCAGAATGGGCCCCGCTTTCGCAGCGGCACCAGCTTCGATTCCGTCACTGCGCTATACGATTTCGACCGAGTG TTGCGCCGCCTGGTGATGCGGGGAACGGAGCACGTCGAAGTCGCTTTACGCGGGAACTGGGCTTACCAGCTGGCCCTTCT CGGCGATGGCCACAGTTATCTGGACGCGAGCCTCTATTCAGACCGCAAGGAGTTCCACGCCAATCTTGCCAAGCTTGCGG GTGAGGTCGGTTGGTCGAGCGAGACCTACATCAAGCACTACCGGGAAAACTATCACGACCCGGCCTTGCCGCCTGTCTGG ATGGTCGCAGAAATGATGTCATTCGGTCAGCTTTCCCGGTGGTACTCGAACCTTGCGGAGCGTGCCTTGCGCAATCGGAT TGCGCAGCCGCTTGGCCTTCCCGAAACTGTCCTGGTGCCGCTCGTGCGTCACATTGTCGATGTGCGCAACATCTGCGCCC ACCATGGGCGACTGTGGAACCGTGGCTTCCGGATGCCTCCCAAGCTTGCGCAGAAGCCCGATCCCTTGATGAGGACATTG GATCAGAAGGCTACGCAAGCCCCTGCCCGGCTCTACAACGGACTTTGCATGATTGCGCACGTGGTGCGTACGGTCGCCCC GGCTTCAACATGGATGTTGGATCTTGGCGCCCATCTTCGGACGCACCCCACCAATGACCTGGCTGCAATGGGCTTTCCCG CTGATTGGCAAACAAGGCCGCTCTGGCAATGA
Upstream 100 bases:
>100_bases ATCTGCAAATCAATCGCACCCGCCCGGCCTCTGTCCGCAAGGATATGCACACTGGGCGGGTCTTTTGTTTTCAGCTGCTT GATCATACAAGACCGGCAGC
Downstream 100 bases:
>100_bases CGGGGCTTCTCTCCCTCAGGCACACCACCGCTCATCCGATCTTCCGGGTGGAGCTCGATCAGGCAGCCTACAACCACGGT TTCCGCAAGGCGAACGGCGT
Product: Abi-like
Products: NA
Alternate protein names: Abi Family Protein; Abi-Like Protein; Phage AbiD Protein; AbiF-Like Protein; AbiD Phage Protein-Like; Abi-Like Family; Abortive Infection Phage Resistance Protein; Abi-Like; Phage-Related Protein; Abi-Like Family Protein; Abortive Infection Bacteriophage Resistance Protein Abi; Phage Resistance Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGPRFRSGTSFDSVTALYDFDRV LRRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYSDRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVW MVAEMMSFGQLSRWYSNLAERALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTL DQKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRPLWQ
Sequences:
>Translated_303_residues MTDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGPRFRSGTSFDSVTALYDFDRV LRRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYSDRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVW MVAEMMSFGQLSRWYSNLAERALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTL DQKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRPLWQ >Mature_302_residues TDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGPRFRSGTSFDSVTALYDFDRVL RRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYSDRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVWM VAEMMSFGQLSRWYSNLAERALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTLD QKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRPLWQ
Specific function: Unknown
COG id: COG4823
COG function: function code V; Abortive infection bacteriophage resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34794; Mature: 34663
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGP CCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCC RFRSGTSFDSVTALYDFDRVLRRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEECCHHHHHHHHHH DRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVWMVAEMMSFGQLSRWYSNLAE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCCCCHHHHHH DQKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRP HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCC LWQ CCC >Mature Secondary Structure TDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGP CCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCC RFRSGTSFDSVTALYDFDRVLRRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEECCHHHHHHHHHH DRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVWMVAEMMSFGQLSRWYSNLAE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCCCCHHHHHH DQKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRP HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCC LWQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA