Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198381

Identifier: 87198381

GI number: 87198381

Start: 392607

End: 393173

Strand: Direct

Name: 87198381

Synonym: Saro_0356

Alternate gene names: NA

Gene position: 392607-393173 (Clockwise)

Preceding gene: 87198380

Following gene: 87198382

Centisome position: 11.02

GC content: 57.67

Gene sequence:

>567_bases
ATGGTTGATATTCCGGCGGGCCTGCTTGCCTACTTTTCCGACAGCAAGACAGAAGCGGCCGTTGATCTGTTGCTCGCGAA
GCAGCGCCCGGATGTGCCGGACGATGTCAGCTGGAGCGATGTTCCAGCGTATTTCCGCGCGTTGCGTGCCGCGCGGCAGA
TCGAGGTGGATTACGCGATCCTGCTCCATGAAATCTGGAGTGCAGTCTGGAAGGCGCTACCGAAGCCGTGGGTTGCCAAG
GAGCCGCACGAGCAGGTGGATGATGCCTTGCTCGAACCACGCCGGATCCTCGGCCAAAACTATGCCCTGCGGGCTTTTGA
GCGTGACAAGCTGCGGTGTGAGCTATTGGTTTATGGCCACAAGGAATCCGGGATACAGATTGGATTCAATGTTTTTCAGG
GCCGAGCTTCCAAGCTGCCGAGAGCCGTGGCTGATTGGGAGAACGACGACGGCACCTATTGGTCGCCTGCGAATCTCGTG
AAGCTCAAGCGTACGATCGACCTCAATCCGCTGCGGACTTATGCTCGTGATGCAACGAACGTGATCAAGAGCCTGGATCG
CGATTGA

Upstream 100 bases:

>100_bases
ACCGGCTCGAACGGGAAATCGGGCAATCCGATGATTGCCGGGACTATCGGCGTTTCCGGCGAACGGTGTGGTACAGGTCC
TACTGAAGGGGTGGCAAAGG

Downstream 100 bases:

>100_bases
GCGACGAGCCGAGTTCGACGGTTATTGATTTGTTGGGAAGTCCGGCCTATCTGCAAATCAATCGCACCCGCCCGGCCTCT
GTCCGCAAGGATATGCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAILLHEIWSAVWKALPKPWVAK
EPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGHKESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLV
KLKRTIDLNPLRTYARDATNVIKSLDRD

Sequences:

>Translated_188_residues
MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAILLHEIWSAVWKALPKPWVAK
EPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGHKESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLV
KLKRTIDLNPLRTYARDATNVIKSLDRD
>Mature_188_residues
MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAILLHEIWSAVWKALPKPWVAK
EPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGHKESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLV
KLKRTIDLNPLRTYARDATNVIKSLDRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21445; Mature: 21445

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAI
CCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLHEIWSAVWKALPKPWVAKEPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGH
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHCCCCEEEEEEEEC
KESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLVKLKRTIDLNPLRTYARDATN
CCCCEEECHHHHHCHHHHCCHHHHCCCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHHH
VIKSLDRD
HHHHHCCC
>Mature Secondary Structure
MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAI
CCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLHEIWSAVWKALPKPWVAKEPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGH
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHCCCCEEEEEEEEC
KESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLVKLKRTIDLNPLRTYARDATN
CCCCEEECHHHHHCHHHHCCHHHHCCCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHHH
VIKSLDRD
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA