Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198381
Identifier: 87198381
GI number: 87198381
Start: 392607
End: 393173
Strand: Direct
Name: 87198381
Synonym: Saro_0356
Alternate gene names: NA
Gene position: 392607-393173 (Clockwise)
Preceding gene: 87198380
Following gene: 87198382
Centisome position: 11.02
GC content: 57.67
Gene sequence:
>567_bases ATGGTTGATATTCCGGCGGGCCTGCTTGCCTACTTTTCCGACAGCAAGACAGAAGCGGCCGTTGATCTGTTGCTCGCGAA GCAGCGCCCGGATGTGCCGGACGATGTCAGCTGGAGCGATGTTCCAGCGTATTTCCGCGCGTTGCGTGCCGCGCGGCAGA TCGAGGTGGATTACGCGATCCTGCTCCATGAAATCTGGAGTGCAGTCTGGAAGGCGCTACCGAAGCCGTGGGTTGCCAAG GAGCCGCACGAGCAGGTGGATGATGCCTTGCTCGAACCACGCCGGATCCTCGGCCAAAACTATGCCCTGCGGGCTTTTGA GCGTGACAAGCTGCGGTGTGAGCTATTGGTTTATGGCCACAAGGAATCCGGGATACAGATTGGATTCAATGTTTTTCAGG GCCGAGCTTCCAAGCTGCCGAGAGCCGTGGCTGATTGGGAGAACGACGACGGCACCTATTGGTCGCCTGCGAATCTCGTG AAGCTCAAGCGTACGATCGACCTCAATCCGCTGCGGACTTATGCTCGTGATGCAACGAACGTGATCAAGAGCCTGGATCG CGATTGA
Upstream 100 bases:
>100_bases ACCGGCTCGAACGGGAAATCGGGCAATCCGATGATTGCCGGGACTATCGGCGTTTCCGGCGAACGGTGTGGTACAGGTCC TACTGAAGGGGTGGCAAAGG
Downstream 100 bases:
>100_bases GCGACGAGCCGAGTTCGACGGTTATTGATTTGTTGGGAAGTCCGGCCTATCTGCAAATCAATCGCACCCGCCCGGCCTCT GTCCGCAAGGATATGCACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAILLHEIWSAVWKALPKPWVAK EPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGHKESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLV KLKRTIDLNPLRTYARDATNVIKSLDRD
Sequences:
>Translated_188_residues MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAILLHEIWSAVWKALPKPWVAK EPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGHKESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLV KLKRTIDLNPLRTYARDATNVIKSLDRD >Mature_188_residues MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAILLHEIWSAVWKALPKPWVAK EPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGHKESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLV KLKRTIDLNPLRTYARDATNVIKSLDRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21445; Mature: 21445
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAI CCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LLHEIWSAVWKALPKPWVAKEPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGH HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHCCCCEEEEEEEEC KESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLVKLKRTIDLNPLRTYARDATN CCCCEEECHHHHHCHHHHCCHHHHCCCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHHH VIKSLDRD HHHHHCCC >Mature Secondary Structure MVDIPAGLLAYFSDSKTEAAVDLLLAKQRPDVPDDVSWSDVPAYFRALRAARQIEVDYAI CCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LLHEIWSAVWKALPKPWVAKEPHEQVDDALLEPRRILGQNYALRAFERDKLRCELLVYGH HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHCCCCEEEEEEEEC KESGIQIGFNVFQGRASKLPRAVADWENDDGTYWSPANLVKLKRTIDLNPLRTYARDATN CCCCEEECHHHHHCHHHHCCHHHHCCCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHHH VIKSLDRD HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA