Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198382

Identifier: 87198382

GI number: 87198382

Start: 393322

End: 394233

Strand: Direct

Name: 87198382

Synonym: Saro_0357

Alternate gene names: NA

Gene position: 393322-394233 (Clockwise)

Preceding gene: 87198381

Following gene: 87198383

Centisome position: 11.04

GC content: 58.88

Gene sequence:

>912_bases
ATGACAGATAGCTTTGCCAAACCTGCGCTGACAATCGACCAACAGATAGCGCATCTGCGCGGCAAAGGCATGGCCATCGA
GGACGAAGCCCGGGCGCGATACTGGCTTACCCATGTCAGCTATTACCGGCTCAGCGCCTATTGGCTCTATTTTGAACATC
CTAAAGGGCAGAATGGGCCCCGCTTTCGCAGCGGCACCAGCTTCGATTCCGTCACTGCGCTATACGATTTCGACCGAGTG
TTGCGCCGCCTGGTGATGCGGGGAACGGAGCACGTCGAAGTCGCTTTACGCGGGAACTGGGCTTACCAGCTGGCCCTTCT
CGGCGATGGCCACAGTTATCTGGACGCGAGCCTCTATTCAGACCGCAAGGAGTTCCACGCCAATCTTGCCAAGCTTGCGG
GTGAGGTCGGTTGGTCGAGCGAGACCTACATCAAGCACTACCGGGAAAACTATCACGACCCGGCCTTGCCGCCTGTCTGG
ATGGTCGCAGAAATGATGTCATTCGGTCAGCTTTCCCGGTGGTACTCGAACCTTGCGGAGCGTGCCTTGCGCAATCGGAT
TGCGCAGCCGCTTGGCCTTCCCGAAACTGTCCTGGTGCCGCTCGTGCGTCACATTGTCGATGTGCGCAACATCTGCGCCC
ACCATGGGCGACTGTGGAACCGTGGCTTCCGGATGCCTCCCAAGCTTGCGCAGAAGCCCGATCCCTTGATGAGGACATTG
GATCAGAAGGCTACGCAAGCCCCTGCCCGGCTCTACAACGGACTTTGCATGATTGCGCACGTGGTGCGTACGGTCGCCCC
GGCTTCAACATGGATGTTGGATCTTGGCGCCCATCTTCGGACGCACCCCACCAATGACCTGGCTGCAATGGGCTTTCCCG
CTGATTGGCAAACAAGGCCGCTCTGGCAATGA

Upstream 100 bases:

>100_bases
ATCTGCAAATCAATCGCACCCGCCCGGCCTCTGTCCGCAAGGATATGCACACTGGGCGGGTCTTTTGTTTTCAGCTGCTT
GATCATACAAGACCGGCAGC

Downstream 100 bases:

>100_bases
CGGGGCTTCTCTCCCTCAGGCACACCACCGCTCATCCGATCTTCCGGGTGGAGCTCGATCAGGCAGCCTACAACCACGGT
TTCCGCAAGGCGAACGGCGT

Product: Abi-like

Products: NA

Alternate protein names: Abi Family Protein; Abi-Like Protein; Phage AbiD Protein; AbiF-Like Protein; AbiD Phage Protein-Like; Abi-Like Family; Abortive Infection Phage Resistance Protein; Abi-Like; Phage-Related Protein; Abi-Like Family Protein; Abortive Infection Bacteriophage Resistance Protein Abi; Phage Resistance Protein; Ypothetical Protein SMU.

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGPRFRSGTSFDSVTALYDFDRV
LRRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYSDRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVW
MVAEMMSFGQLSRWYSNLAERALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTL
DQKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRPLWQ

Sequences:

>Translated_303_residues
MTDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGPRFRSGTSFDSVTALYDFDRV
LRRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYSDRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVW
MVAEMMSFGQLSRWYSNLAERALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTL
DQKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRPLWQ
>Mature_302_residues
TDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGPRFRSGTSFDSVTALYDFDRVL
RRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYSDRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVWM
VAEMMSFGQLSRWYSNLAERALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTLD
QKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRPLWQ

Specific function: Unknown

COG id: COG4823

COG function: function code V; Abortive infection bacteriophage resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34794; Mature: 34663

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGP
CCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCC
RFRSGTSFDSVTALYDFDRVLRRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEECCHHHHHHHHHH
DRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVWMVAEMMSFGQLSRWYSNLAE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCCCCHHHHHH
DQKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCC
LWQ
CCC
>Mature Secondary Structure 
TDSFAKPALTIDQQIAHLRGKGMAIEDEARARYWLTHVSYYRLSAYWLYFEHPKGQNGP
CCCCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCC
RFRSGTSFDSVTALYDFDRVLRRLVMRGTEHVEVALRGNWAYQLALLGDGHSYLDASLYS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEECCHHHHHHHHHH
DRKEFHANLAKLAGEVGWSSETYIKHYRENYHDPALPPVWMVAEMMSFGQLSRWYSNLAE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RALRNRIAQPLGLPETVLVPLVRHIVDVRNICAHHGRLWNRGFRMPPKLAQKPDPLMRTL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCCCCHHHHHH
DQKATQAPARLYNGLCMIAHVVRTVAPASTWMLDLGAHLRTHPTNDLAAMGFPADWQTRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCC
LWQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA