Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198297
Identifier: 87198297
GI number: 87198297
Start: 289903
End: 290175
Strand: Direct
Name: 87198297
Synonym: Saro_0272
Alternate gene names: NA
Gene position: 289903-290175 (Clockwise)
Preceding gene: 87198292
Following gene: 87198300
Centisome position: 8.14
GC content: 63.74
Gene sequence:
>273_bases ATGGGCGGTTCCGCCGATGCCGGCACTGCATCGCGCATCCGCGAGCACATGGAAGTGATCGGCGCCGACGGCGTCCACGT CGGCACGGTCGACGCGGTCGAAGGCCACCGCATCAAGCTGACGAAACGCGATTCCGACGCGGGCTATGAAGGCGGAACCC ATTCGGGCCACCATCATTACCTTTCGTGCGGGCTGGTTGCCGAAATCGAGGGCGACAAGGTGCGCCTCTCGGCCAATGGC GACGTGGCCTACGGAATGCTCGAGGAAGAATAA
Upstream 100 bases:
>100_bases CGTGCGCAGCCCCGGCGGCGCGGACCAGCAGGTCGGCGGCGAGCGCTGGAGCGGCCAGTCCGGCCAGCAGTCGCAGTTCG AAAGCGGCAGCAGCGGCCAG
Downstream 100 bases:
>100_bases GTCCGGGAGGAGCGCGAGATCATCCCGCATCCCTCCTCCGGGCTGCAGGAACGTCCCGCCCCCTTCGGGACCAGGTCGCG CCACGCGGCCGGAAGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MGGSADAGTASRIREHMEVIGADGVHVGTVDAVEGHRIKLTKRDSDAGYEGGTHSGHHHYLSCGLVAEIEGDKVRLSANG DVAYGMLEEE
Sequences:
>Translated_90_residues MGGSADAGTASRIREHMEVIGADGVHVGTVDAVEGHRIKLTKRDSDAGYEGGTHSGHHHYLSCGLVAEIEGDKVRLSANG DVAYGMLEEE >Mature_89_residues GGSADAGTASRIREHMEVIGADGVHVGTVDAVEGHRIKLTKRDSDAGYEGGTHSGHHHYLSCGLVAEIEGDKVRLSANGD VAYGMLEEE
Specific function: Unknown
COG id: COG3798
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9445; Mature: 9314
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGSADAGTASRIREHMEVIGADGVHVGTVDAVEGHRIKLTKRDSDAGYEGGTHSGHHHY CCCCCCCCCHHHHHHHHHHHCCCCEEECEEECCCCCEEEEEECCCCCCCCCCCCCCCEEE LSCGLVAEIEGDKVRLSANGDVAYGMLEEE EECCEEEEECCCEEEEEECCCEEEEEEECC >Mature Secondary Structure GGSADAGTASRIREHMEVIGADGVHVGTVDAVEGHRIKLTKRDSDAGYEGGTHSGHHHY CCCCCCCCHHHHHHHHHHHCCCCEEECEEECCCCCEEEEEECCCCCCCCCCCCCCCEEE LSCGLVAEIEGDKVRLSANGDVAYGMLEEE EECCEEEEECCCEEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA