Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198300
Identifier: 87198300
GI number: 87198300
Start: 293585
End: 293833
Strand: Direct
Name: 87198300
Synonym: Saro_0275
Alternate gene names: NA
Gene position: 293585-293833 (Clockwise)
Preceding gene: 87198297
Following gene: 87198302
Centisome position: 8.24
GC content: 66.27
Gene sequence:
>249_bases ATGCTGAATCTGCTCTCGATCATCTTCACCGGACTTGTCGTGGGCGTGCTTGCCCGGTTCTTCTACCCGGGCGATGTCGA CATCGGGATGCTCAAGACCGTCCTGCTCGGCGTGGGCGGCGCGCTGGTGGCGGGGTTGCTGGCGAGCTGGCGGTCGGGCA GCACTTTCGGCGAGGGCGTGAACCGCGCCGGGTGCCTGGCATCGGTGCTGGGCGCGATGCTGCTGATCTTCCTCGGGCGC AATCTCTAG
Upstream 100 bases:
>100_bases AATGAAGGCGGGCGGAATTTTTTGTTCGCGGCCAACCAAATTGTGGACAAGAACCGGTCAACCGCCCCCATATGATGTGT CCACAGGAATGGAGCCGCGC
Downstream 100 bases:
>100_bases GCTGCAACGACCGCGCTCTGCGGGCGGTCAGGCTCTTGGTGCGATCCGTCGATAGCTGAGCGCTTCGGCGACATGGATGC GCCCGACCGTTTCCGCTCCC
Product: transmembrane region and signal peptide prediction
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MLNLLSIIFTGLVVGVLARFFYPGDVDIGMLKTVLLGVGGALVAGLLASWRSGSTFGEGVNRAGCLASVLGAMLLIFLGR NL
Sequences:
>Translated_82_residues MLNLLSIIFTGLVVGVLARFFYPGDVDIGMLKTVLLGVGGALVAGLLASWRSGSTFGEGVNRAGCLASVLGAMLLIFLGR NL >Mature_82_residues MLNLLSIIFTGLVVGVLARFFYPGDVDIGMLKTVLLGVGGALVAGLLASWRSGSTFGEGVNRAGCLASVLGAMLLIFLGR NL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8455; Mature: 8455
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLLSIIFTGLVVGVLARFFYPGDVDIGMLKTVLLGVGGALVAGLLASWRSGSTFGEGV CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHCC NRAGCLASVLGAMLLIFLGRNL CHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLNLLSIIFTGLVVGVLARFFYPGDVDIGMLKTVLLGVGGALVAGLLASWRSGSTFGEGV CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHCC NRAGCLASVLGAMLLIFLGRNL CHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA