Click here to switch to the map view.

The map label for this gene is 86751788

Identifier: 86751788

GI number: 86751788

Start: 5306357

End: 5307550

Strand: Reverse

Name: 86751788

Synonym: RPB_4690

Alternate gene names: NA

Gene position: 5307550-5306357 (Counterclockwise)

Preceding gene: 86751789

Following gene: 86751783

Centisome position: 99.55

GC content: 64.07

Gene sequence:

>1194_bases
ATGAACGTCAAGCTGTTGTCCGCCGCGCTGGCGACCAGCGCCCTGTTCGCCATTGCTCCGGCGTCGGCGCAGGGCGTCAA
GATCGGCATCCTCAACGATCAGTCCGGCGTCTATGCCGATTACGGCGGCAAGTGGTCGCTCGAAGCCGCCAAGATGGCGG
TGGAGGATTTCGGCGGCGAGGTGCTCGGCCAGAAGATCGAGATCGTTTCGGCCGACCATCAGAACAAGCCCGACACGGCG
GTTGCGATCGCGCGGAAGTGGTACGACGTCGACGGCGTCGACATGATCACCGAGCTGACCACCTCGTCGGTGGCGCTGGC
GATCCAGGACCTGTCGAGGGAAAAGAAGAAGATCGACATTGTGGTCGGCGCCGCGACCTCGCGCATCACCGGCGACGCCT
GCCAGCCTTACGGCTTCCATTGGGCCTATGATACGCACGCGCTCGCGGTCGGCACCGGCGGCGCGCTGGTGAAGGCGGGC
GGTGATTCCTGGTTCTTCCTCACCGCGGACTACGCCTTTGGATATGCGTTGGAAAAGGACACCAGCGAAGTCGTCAAGGC
GAACGGCGGCAAGGTGCTCGGCTCGGTCCGGCATCCGCTGAATTCGTCGGACTTCTCCTCGTTCCTGCTGCAGGCGCAGA
GCTCGAAGGCGAAGATCATCGGCCTTGCCAATGCCGGCCTCGACACCGCCAATTCGATCAAGCAGGCCTCCGAATTCGGC
ATCGTCGCCGGCGGCCAGAAACTCGCCGGGCTGCTGCTCACGCTCGCCGAGGTGCACGGCCTCGGTCTCAAGGCGGCGCA
GGGGCTGGTGCTGACCGAGGCGTATTACTGGGACCGCGACGACAAGTCCCGCGAGTTCGCCGAGCGCTTCTTCAAGCGGA
CCAGCCGGATGCCGAACATGATCCAGGCCGGCACCTATTCGGCGACGCTGTCCTATCTCAAGGCGGTGAAGGCCGCCGGC
ACCAAGGACACCGAAGCGGTGGCGGCGAAGCTCAAGAAGCTCCCGGTCGACGACGCCTTCGCCAAGGGCAAGGTGCTGGC
CAACGGCCGCTTCGTCCACGATCTGTATCTGTTCGAGGTGAAGAAGCCGGAAGAGTCCAAGAAGCCGTGGGACTATTACA
AGCTGATCTCGACGGTCGAGGGCTACATGGCGTTTCCGAGTGCCGCCGAGAGCGGCTGCCCGTTGACCAGGTAA

Upstream 100 bases:

>100_bases
GGCACGTAGTCCTGTCACAAAATCCCAAGAAAAATACACTGGGCAGTCGTCGGCTTCTTGAATAGTGTGCCGCCAACCAA
GAAATTCCGGGAGGTCCACG

Downstream 100 bases:

>100_bases
GTCACCCGCCGCGTGCCGAGGCCGGCGTTCCGTGAGGCGCCGGCCTTCATGCGTGTGAACGGCGTCCAGCGGGAGCCGTC
ATTGCGAGGAGCGAAGCGAC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNVKLLSAALATSALFAIAPASAQGVKIGILNDQSGVYADYGGKWSLEAAKMAVEDFGGEVLGQKIEIVSADHQNKPDTA
VAIARKWYDVDGVDMITELTTSSVALAIQDLSREKKKIDIVVGAATSRITGDACQPYGFHWAYDTHALAVGTGGALVKAG
GDSWFFLTADYAFGYALEKDTSEVVKANGGKVLGSVRHPLNSSDFSSFLLQAQSSKAKIIGLANAGLDTANSIKQASEFG
IVAGGQKLAGLLLTLAEVHGLGLKAAQGLVLTEAYYWDRDDKSREFAERFFKRTSRMPNMIQAGTYSATLSYLKAVKAAG
TKDTEAVAAKLKKLPVDDAFAKGKVLANGRFVHDLYLFEVKKPEESKKPWDYYKLISTVEGYMAFPSAAESGCPLTR

Sequences:

>Translated_397_residues
MNVKLLSAALATSALFAIAPASAQGVKIGILNDQSGVYADYGGKWSLEAAKMAVEDFGGEVLGQKIEIVSADHQNKPDTA
VAIARKWYDVDGVDMITELTTSSVALAIQDLSREKKKIDIVVGAATSRITGDACQPYGFHWAYDTHALAVGTGGALVKAG
GDSWFFLTADYAFGYALEKDTSEVVKANGGKVLGSVRHPLNSSDFSSFLLQAQSSKAKIIGLANAGLDTANSIKQASEFG
IVAGGQKLAGLLLTLAEVHGLGLKAAQGLVLTEAYYWDRDDKSREFAERFFKRTSRMPNMIQAGTYSATLSYLKAVKAAG
TKDTEAVAAKLKKLPVDDAFAKGKVLANGRFVHDLYLFEVKKPEESKKPWDYYKLISTVEGYMAFPSAAESGCPLTR
>Mature_397_residues
MNVKLLSAALATSALFAIAPASAQGVKIGILNDQSGVYADYGGKWSLEAAKMAVEDFGGEVLGQKIEIVSADHQNKPDTA
VAIARKWYDVDGVDMITELTTSSVALAIQDLSREKKKIDIVVGAATSRITGDACQPYGFHWAYDTHALAVGTGGALVKAG
GDSWFFLTADYAFGYALEKDTSEVVKANGGKVLGSVRHPLNSSDFSSFLLQAQSSKAKIIGLANAGLDTANSIKQASEFG
IVAGGQKLAGLLLTLAEVHGLGLKAAQGLVLTEAYYWDRDDKSREFAERFFKRTSRMPNMIQAGTYSATLSYLKAVKAAG
TKDTEAVAAKLKKLPVDDAFAKGKVLANGRFVHDLYLFEVKKPEESKKPWDYYKLISTVEGYMAFPSAAESGCPLTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42450; Mature: 42450

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKLLSAALATSALFAIAPASAQGVKIGILNDQSGVYADYGGKWSLEAAKMAVEDFGGE
CCHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCEEECCCCEEEHHHHHHHHHHHCHH
VLGQKIEIVSADHQNKPDTAVAIARKWYDVDGVDMITELTTSSVALAIQDLSREKKKIDI
HHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VVGAATSRITGDACQPYGFHWAYDTHALAVGTGGALVKAGGDSWFFLTADYAFGYALEKD
EEECCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEECCCEEEEEEECCCCCEEECCC
TSEVVKANGGKVLGSVRHPLNSSDFSSFLLQAQSSKAKIIGLANAGLDTANSIKQASEFG
HHHHHHCCCCEEEEHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCC
IVAGGQKLAGLLLTLAEVHGLGLKAAQGLVLTEAYYWDRDDKSREFAERFFKRTSRMPNM
EEECCHHHHHHHHHHHHHHCCCHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCH
IQAGTYSATLSYLKAVKAAGTKDTEAVAAKLKKLPVDDAFAKGKVLANGRFVHDLYLFEV
HHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCEEEECCEEEEEEEEEEE
KKPEESKKPWDYYKLISTVEGYMAFPSAAESGCPLTR
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVKLLSAALATSALFAIAPASAQGVKIGILNDQSGVYADYGGKWSLEAAKMAVEDFGGE
CCHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCEEECCCCEEEHHHHHHHHHHHCHH
VLGQKIEIVSADHQNKPDTAVAIARKWYDVDGVDMITELTTSSVALAIQDLSREKKKIDI
HHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VVGAATSRITGDACQPYGFHWAYDTHALAVGTGGALVKAGGDSWFFLTADYAFGYALEKD
EEECCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEECCCEEEEEEECCCCCEEECCC
TSEVVKANGGKVLGSVRHPLNSSDFSSFLLQAQSSKAKIIGLANAGLDTANSIKQASEFG
HHHHHHCCCCEEEEHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCC
IVAGGQKLAGLLLTLAEVHGLGLKAAQGLVLTEAYYWDRDDKSREFAERFFKRTSRMPNM
EEECCHHHHHHHHHHHHHHCCCHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCH
IQAGTYSATLSYLKAVKAAGTKDTEAVAAKLKKLPVDDAFAKGKVLANGRFVHDLYLFEV
HHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCEEEECCEEEEEEEEEEE
KKPEESKKPWDYYKLISTVEGYMAFPSAAESGCPLTR
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA