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The map label for this gene is 86751728

Identifier: 86751728

GI number: 86751728

Start: 5232143

End: 5233294

Strand: Reverse

Name: 86751728

Synonym: RPB_4630

Alternate gene names: NA

Gene position: 5233294-5232143 (Counterclockwise)

Preceding gene: 86751729

Following gene: 86751724

Centisome position: 98.16

GC content: 65.28

Gene sequence:

>1152_bases
ATGCAACAGACCAAGACTCTGATCGTCGCGCTGGCGACGATGCTGGCCGGTGTGACTGCGGCGCAGGCCGAGATCAAGAT
CGGCATCACCATGAGCGCGTCCGGCCCCGGCGCCGCGCTCGGCCAGCCGCAATCCAAGACGGTGGCGGCGCTGCCCAAGG
AAATCGGCGGCGAGAAAGTGACCTACTTCGCGCTGGACGACGAATCCGATCCGACCAAGGCGGCGCAGAATGCCCGCAAG
CTGCTGTCGGAAGAGAAGGTCGACGTGCTGATCGGCTCGTCGCTGACCCCGGTGAGCCTGCCGCTGATCGACATCGCCGC
CGAAGCCAAGACGCCGCTGATGACGATGGCGGCGGCCGCGATCCTGGTCGCGCCGATGGATGAGCGGCGCAAATGGGTCT
ACAAGGTGGTGCCGAACGACGACATCATGGCGGAGGCGATCGGCAAATACATCGCCAAGACCGGCGCCAAGAAGGTCGGC
TATATCGGCTTCTCCGACGCCTACGGCGAAGGCTATTACAAGGTGCTCGCCGCCGCGGCGCCCAAGCTCGGCTTCGAACT
CACCACCCACGAGGTCTATGCGCGCAGCGATGCCAGCGTCACCGGCCAGGTGCTGAAGATCATCGCCACCAAGCCCGACG
CGGTGTTCATCGCCTCTGCCGGAACGCCGGCGGTGCTGCCTCAGAAGGCGCTGCGCGAGCGCGGCTTCAAGGGGGCGATC
TATCAGACCCACGGCGTCGCCACCGAGGAATTCATCAAGCTCGGCGGCAAGGACGTCGAAGGCGCGATCTTCGCCGGCGA
GGCGTTCTCGGGCGCCGAGGATATGCCGGCCGACAGTCCGTTCCGCAAGGTCAAGGCGCGCTTCGTCGACGCCTACAAGG
CCGCCAATGGCGGCGCGGCGCCGACCATTTTCGGCGTACATCTGTGGGATTCGATGACGCTGGTCGAGAACGCGATTCCC
GCGGCGCTCAAGGCTGCCAAGCCCGGCACGCCGGAATTCCGCGCCGCGATCCGCGACCAGATCGAGAAGTCGAAGGACCT
CGCGCTCAACAACGGCCTGTCGAATATGACGCCCGACAACCATAACGGCTATGACGAGCGCTCCGCATTCCTGATCGAGA
TCCGCGACGGCGCGTTCCGGTTGAAGCAGTAA

Upstream 100 bases:

>100_bases
CCCAGGATCCGAGACTGGTCGAAAGCTATCTCGGCCTCGGCGGGCACGAGTACTGACGACACGACGATTACCAAAGAAGA
ACCAACGGAGGAGGACGTCA

Downstream 100 bases:

>100_bases
AGAAGAGGGCTTAGTAACCTCTCCCCGCTCGCGGGGAGAGGCCGGATCACCGCGTAGCGGTGATCCGGGTGAGGGGGCGT
CTCGACAAGGTCGAGAGTTC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MQQTKTLIVALATMLAGVTAAQAEIKIGITMSASGPGAALGQPQSKTVAALPKEIGGEKVTYFALDDESDPTKAAQNARK
LLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTGAKKVG
YIGFSDAYGEGYYKVLAAAAPKLGFELTTHEVYARSDASVTGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKGAI
YQTHGVATEEFIKLGGKDVEGAIFAGEAFSGAEDMPADSPFRKVKARFVDAYKAANGGAAPTIFGVHLWDSMTLVENAIP
AALKAAKPGTPEFRAAIRDQIEKSKDLALNNGLSNMTPDNHNGYDERSAFLIEIRDGAFRLKQ

Sequences:

>Translated_383_residues
MQQTKTLIVALATMLAGVTAAQAEIKIGITMSASGPGAALGQPQSKTVAALPKEIGGEKVTYFALDDESDPTKAAQNARK
LLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTGAKKVG
YIGFSDAYGEGYYKVLAAAAPKLGFELTTHEVYARSDASVTGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKGAI
YQTHGVATEEFIKLGGKDVEGAIFAGEAFSGAEDMPADSPFRKVKARFVDAYKAANGGAAPTIFGVHLWDSMTLVENAIP
AALKAAKPGTPEFRAAIRDQIEKSKDLALNNGLSNMTPDNHNGYDERSAFLIEIRDGAFRLKQ
>Mature_383_residues
MQQTKTLIVALATMLAGVTAAQAEIKIGITMSASGPGAALGQPQSKTVAALPKEIGGEKVTYFALDDESDPTKAAQNARK
LLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTGAKKVG
YIGFSDAYGEGYYKVLAAAAPKLGFELTTHEVYARSDASVTGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKGAI
YQTHGVATEEFIKLGGKDVEGAIFAGEAFSGAEDMPADSPFRKVKARFVDAYKAANGGAAPTIFGVHLWDSMTLVENAIP
AALKAAKPGTPEFRAAIRDQIEKSKDLALNNGLSNMTPDNHNGYDERSAFLIEIRDGAFRLKQ

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40562; Mature: 40562

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTKTLIVALATMLAGVTAAQAEIKIGITMSASGPGAALGQPQSKTVAALPKEIGGEKV
CCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEE
TYFALDDESDPTKAAQNARKLLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAA
EEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHH
ILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTGAKKVGYIGFSDAYGEGYYKVLAAAA
HHCCCCHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHC
PKLGFELTTHEVYARSDASVTGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKGAI
CCCCCEEEHHHEEECCCCCHHHHHHEEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCCE
YQTHGVATEEFIKLGGKDVEGAIFAGEAFSGAEDMPADSPFRKVKARFVDAYKAANGGAA
EEECCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PTIFGVHLWDSMTLVENAIPAALKAAKPGTPEFRAAIRDQIEKSKDLALNNGLSNMTPDN
CEEEEEEHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HNGYDERSAFLIEIRDGAFRLKQ
CCCCCCCCEEEEEEECCCEECCC
>Mature Secondary Structure
MQQTKTLIVALATMLAGVTAAQAEIKIGITMSASGPGAALGQPQSKTVAALPKEIGGEKV
CCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEE
TYFALDDESDPTKAAQNARKLLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAA
EEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHH
ILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTGAKKVGYIGFSDAYGEGYYKVLAAAA
HHCCCCHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHC
PKLGFELTTHEVYARSDASVTGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKGAI
CCCCCEEEHHHEEECCCCCHHHHHHEEEECCCCEEEEECCCCCCCCCHHHHHHCCCCCCE
YQTHGVATEEFIKLGGKDVEGAIFAGEAFSGAEDMPADSPFRKVKARFVDAYKAANGGAA
EEECCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PTIFGVHLWDSMTLVENAIPAALKAAKPGTPEFRAAIRDQIEKSKDLALNNGLSNMTPDN
CEEEEEEHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
HNGYDERSAFLIEIRDGAFRLKQ
CCCCCCCCEEEEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]