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The map label for this gene is 86751724

Identifier: 86751724

GI number: 86751724

Start: 5226683

End: 5227558

Strand: Reverse

Name: 86751724

Synonym: RPB_4626

Alternate gene names: NA

Gene position: 5227558-5226683 (Counterclockwise)

Preceding gene: 86751728

Following gene: 86751721

Centisome position: 98.05

GC content: 67.92

Gene sequence:

>876_bases
ATGACGTTTCGTGTACCCGGCCTGTCGCGCCGCTCGATCACCACCATCGCCGCTTTGATCGGCGTGGTGTCGCTGGCGAT
CGGGGCGCATGCCGCGCTGAACAAGCGCGTCGGCGATCCGAACGGCAGCAAGGATGTCGCCCGGATCGACGGCTCCGGCC
CGGCCGCGTCGCGTTTTGCGCTGGTGATCGGCAACGGCCGCTATCCGGATGCGTCGCAGCCGATGGTGCAACCGATCAAC
GATGCGCGCGCGCTCAGCGGAGCGTTGCGTCGCGAGGGTTTCGACGTCGACATGATCGAGGATGCCAACCGCGACGATCT
GCTCCAGGCGATCGAGCGGATGAAGTCCCGCGTCACCAAGGATTCCACCGTCGTGCTGTTCTTCGGCGGCTATGGCATCC
AGTCCGGCCGCGAGAGCTACATGATCCCGGTCGACGCCCGGATCTGGAACGAGGCCGATGTCCGCCGCACCGGTATCAGC
ATCGAATCCGTGCTCGGCGCGATGCAGGAGCGCGGCGTGCAAGCCAAGCTCGCGATCGTCGACGCCTCGCGCCGCAATCC
CTATGAGCGCCGCTTCCGTGCCTATTCGCATGGTCTTGCGCCGATCAATGCGCCGGCCAACGCGCTGGTGCTGTCATCGT
CGACGCCCGGCAAGGTCGCCGAGGACGGCGACGGCCAGAACAGCATCCTCGTCGGGGCGCTGCTCGGCTCGATCTCGTCT
CGCGTCGTCAGCGCCGAAGCCGCTTTCACCAAGGCGCGGCTCGCCGTCACGCGCGCGACCAACGGCGCGCAAGTGCCGTC
GCTGTCGTCCTCGCTGGTCGACGACGTCACCCTGGCGCCGGTCACCGCCGATGCAACCCCGGCGAGCGGCGGCTGA

Upstream 100 bases:

>100_bases
TGCCGCAAATTGAGCGCAATTTTCCCGCACTGGATTGGTTCATCCTTCACAGACAAATGTCTCCGGCGCGAACGATGTCG
CGTGGATAAGGAAGACTGAG

Downstream 100 bases:

>100_bases
CCACAGCAGCAACCACGTTCAGAGTTCAGCGAAAAGACCCGAGCCGGACAGCGGCTCGGGTCTTTTTGTATCTGCGATGC
GCGTTGCGGTCGCTCAGTTC

Product: peptidase C14, caspase catalytic subunit p20

Products: NA

Alternate protein names: Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; Caspase-Like Domain-Containing Protein; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Caspase; Peptidylprolyl Isomerase; Caspase-1 P; ICE-Like Protease

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTFRVPGLSRRSITTIAALIGVVSLAIGAHAALNKRVGDPNGSKDVARIDGSGPAASRFALVIGNGRYPDASQPMVQPIN
DARALSGALRREGFDVDMIEDANRDDLLQAIERMKSRVTKDSTVVLFFGGYGIQSGRESYMIPVDARIWNEADVRRTGIS
IESVLGAMQERGVQAKLAIVDASRRNPYERRFRAYSHGLAPINAPANALVLSSSTPGKVAEDGDGQNSILVGALLGSISS
RVVSAEAAFTKARLAVTRATNGAQVPSLSSSLVDDVTLAPVTADATPASGG

Sequences:

>Translated_291_residues
MTFRVPGLSRRSITTIAALIGVVSLAIGAHAALNKRVGDPNGSKDVARIDGSGPAASRFALVIGNGRYPDASQPMVQPIN
DARALSGALRREGFDVDMIEDANRDDLLQAIERMKSRVTKDSTVVLFFGGYGIQSGRESYMIPVDARIWNEADVRRTGIS
IESVLGAMQERGVQAKLAIVDASRRNPYERRFRAYSHGLAPINAPANALVLSSSTPGKVAEDGDGQNSILVGALLGSISS
RVVSAEAAFTKARLAVTRATNGAQVPSLSSSLVDDVTLAPVTADATPASGG
>Mature_290_residues
TFRVPGLSRRSITTIAALIGVVSLAIGAHAALNKRVGDPNGSKDVARIDGSGPAASRFALVIGNGRYPDASQPMVQPIND
ARALSGALRREGFDVDMIEDANRDDLLQAIERMKSRVTKDSTVVLFFGGYGIQSGRESYMIPVDARIWNEADVRRTGISI
ESVLGAMQERGVQAKLAIVDASRRNPYERRFRAYSHGLAPINAPANALVLSSSTPGKVAEDGDGQNSILVGALLGSISSR
VVSAEAAFTKARLAVTRATNGAQVPSLSSSLVDDVTLAPVTADATPASGG

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30515; Mature: 30384

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50208 CASPASE_P20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRVPGLSRRSITTIAALIGVVSLAIGAHAALNKRVGDPNGSKDVARIDGSGPAASRFA
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEE
LVIGNGRYPDASQPMVQPINDARALSGALRREGFDVDMIEDANRDDLLQAIERMKSRVTK
EEEECCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCC
DSTVVLFFGGYGIQSGRESYMIPVDARIWNEADVRRTGISIESVLGAMQERGVQAKLAIV
CCEEEEEEECCCCCCCCCCEEEEECHHHCCCCHHHHHCCCHHHHHHHHHHCCCEEEEEEE
DASRRNPYERRFRAYSHGLAPINAPANALVLSSSTPGKVAEDGDGQNSILVGALLGSISS
ECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHH
RVVSAEAAFTKARLAVTRATNGAQVPSLSSSLVDDVTLAPVTADATPASGG
HHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHCCEEECEEECCCCCCCCC
>Mature Secondary Structure 
TFRVPGLSRRSITTIAALIGVVSLAIGAHAALNKRVGDPNGSKDVARIDGSGPAASRFA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEE
LVIGNGRYPDASQPMVQPINDARALSGALRREGFDVDMIEDANRDDLLQAIERMKSRVTK
EEEECCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCC
DSTVVLFFGGYGIQSGRESYMIPVDARIWNEADVRRTGISIESVLGAMQERGVQAKLAIV
CCEEEEEEECCCCCCCCCCEEEEECHHHCCCCHHHHHCCCHHHHHHHHHHCCCEEEEEEE
DASRRNPYERRFRAYSHGLAPINAPANALVLSSSTPGKVAEDGDGQNSILVGALLGSISS
ECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHH
RVVSAEAAFTKARLAVTRATNGAQVPSLSSSLVDDVTLAPVTADATPASGG
HHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHCCEEECEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA