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The map label for this gene is mmgC [H]

Identifier: 86751704

GI number: 86751704

Start: 5201391

End: 5203181

Strand: Reverse

Name: mmgC [H]

Synonym: RPB_4606

Alternate gene names: 86751704

Gene position: 5203181-5201391 (Counterclockwise)

Preceding gene: 86751705

Following gene: 86751703

Centisome position: 97.59

GC content: 66.22

Gene sequence:

>1791_bases
ATGACGATCTACAAGGCTCCGGTTGAAGATGTCAGCTTCCTGCTGAACAACGTGTTTCACTTCGACAAGTACAACAACCT
GCCCGGCTTCGCGGACGCGGCACCCGACGTGCGCGACGCGATCATCAACGAGGCGGCGCGGCTCTCCGAGCAGGTGCTGG
CGCCGCTGAATGCGGTCGGCGACCGCGAGGGCTGCGTCCGCCACGACGACGGCAGCGTCACGACGCCGAAGGGCTTCAAG
GAAGCCTACAAGCAGATCGCCGAAGGCGGCTGGCTCGGCCTGTCGTCGCCGCCGGAATTCGGCGGCCAGGGCCTGCCGGT
GACGCTGACGCAGACCGTCGCCGAATTCCAGATCTCCGCCAACATGGCGTTCTCGATGTATCACGGCCTGACCATGGGCG
CCGCCGCGGCGCTGCTGGTCCACGGCAATGCCGAGCAGAAGGCGCTGTATCTGCCGAAGATGACCGCCGGCGAGTGGACC
GGCACCATGAACCTGACCGAGCCGCAATGCGGCACCGATCTCGGACTGCTGCGCACCAAGGCGGTGAAGCAGGCCGACGG
CAGCTACAAGATCACCGGCACCAAGATCTTCATCTCCGCCGGCGAGCACGACCTGTCAGAGAACATCATCCATTTGGTGC
TGGCACGGATCGAAGGCGCGCCCGCCGGGATCAAGGGCGTGTCGCTGTTCGTGGTGCCGAAGATCCTGGTCAATGCCGAT
GGTTCGCTCGGCGCCCGCAACGGCGTGATGTGCGGCTCGATCGAGCACAAGATGGGCATCCACGGCAACGCCACTTGCAC
AATGAACTACGACGATGCCACCGGCTGGCTGATCGGCGAAGAAAACAAGGGCATGCAGGGCATGTTCGTGATGATGAACG
AGGCTCGCCTCGGCGTCGCCGTGCAGGGCCTCGCGCAGTCCGAGGTCGCGTATCAGAACGCGGTGGCCTATGCGCGCGAG
CGTCTGCAGGGCCGTGCGCTGTCGGGACCGAAGGCGACCGACAAGCCGGCCGATCCGATCATCGTGCATCCGGACGTGCG
CCGCGTGCTGCTCACCATCCGCGCCTTCAACGAGGCGGCGCGCGCGCTGGTGATGTGGACGGCGCTGAAGAGCGACGTCG
CGCACCGTTCCGACGACGCCAAGGAGCGGCAGATCGCCGACGATCATCTCGGCCTGATGACGCCGGTTCTGAAGGGCGTG
CTGACCGACGTCGGCTTCTCCAACGCGGTGCTGGCGCAGCAGGTCTATGGCGGCCACGGCTACATCGCCGCCAACGGCAT
GGAGCAGTTCGTCCGCGATGCCCGCATCGCGATGATCTACGAGGGCGCCAACGGCATTCAGGCGCTGGATCTCGTCGGCC
GCAAATTGCCGCGCGACGGCGGCCGCGCGGTGATGGCGTTCTTCGCCGAGGTCGGCGCCTTCGCCAAGGAGCACGGCGGC
GACGAGGCGATGAAGCCGTTCGTCACGCCGCTGTCGACCTCGCTCAGCCATCTGCAGCAGGCCACCACCTGGCTGATGCT
GAACGCGATGGCGGCGCCCGACAATGCCGGCGCCGGCGCCACCGATTACATGCAGCTGTTCGGCCTGGTGGCCTGCGGCT
ACATGTGGGCGAAGATGGCCAAGGTGGCACAGGACAAGATTGCCGCCGACGGCGCCACGCCCTATCTGACCACCAAGCTC
GTCACCGGCCGGTTTTTTGCCGAGCGAACCCTGCCGGGCACCGCGCTGCATCTCGCGCGAATCCAGGCCGGCAGCGGTAC
GGTGATGGAATTGCCGGCGGAAGCGTTCTGA

Upstream 100 bases:

>100_bases
CGCGACAATAAGGCGCTGCGACCGGCCGAATTTCCCTCGCCGCCGTTCGAGATCACTCGGATGGCGGACACCTCACAACA
ATCCCGATCGAGAGAACCGC

Downstream 100 bases:

>100_bases
GCAAGCCCCAAGCGTCATTGCGAGCGAAGCGAAGCAATCCAGAAGCCGCACCCAAAGACTGGATTGCTTCGTCGCTATCG
CTCCTCGCAATGACGAAATG

Product: Acyl-CoA dehydrogenase-like

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MTIYKAPVEDVSFLLNNVFHFDKYNNLPGFADAAPDVRDAIINEAARLSEQVLAPLNAVGDREGCVRHDDGSVTTPKGFK
EAYKQIAEGGWLGLSSPPEFGGQGLPVTLTQTVAEFQISANMAFSMYHGLTMGAAAALLVHGNAEQKALYLPKMTAGEWT
GTMNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPAGIKGVSLFVVPKILVNAD
GSLGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARE
RLQGRALSGPKATDKPADPIIVHPDVRRVLLTIRAFNEAARALVMWTALKSDVAHRSDDAKERQIADDHLGLMTPVLKGV
LTDVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMIYEGANGIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHGG
DEAMKPFVTPLSTSLSHLQQATTWLMLNAMAAPDNAGAGATDYMQLFGLVACGYMWAKMAKVAQDKIAADGATPYLTTKL
VTGRFFAERTLPGTALHLARIQAGSGTVMELPAEAF

Sequences:

>Translated_596_residues
MTIYKAPVEDVSFLLNNVFHFDKYNNLPGFADAAPDVRDAIINEAARLSEQVLAPLNAVGDREGCVRHDDGSVTTPKGFK
EAYKQIAEGGWLGLSSPPEFGGQGLPVTLTQTVAEFQISANMAFSMYHGLTMGAAAALLVHGNAEQKALYLPKMTAGEWT
GTMNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPAGIKGVSLFVVPKILVNAD
GSLGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARE
RLQGRALSGPKATDKPADPIIVHPDVRRVLLTIRAFNEAARALVMWTALKSDVAHRSDDAKERQIADDHLGLMTPVLKGV
LTDVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMIYEGANGIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHGG
DEAMKPFVTPLSTSLSHLQQATTWLMLNAMAAPDNAGAGATDYMQLFGLVACGYMWAKMAKVAQDKIAADGATPYLTTKL
VTGRFFAERTLPGTALHLARIQAGSGTVMELPAEAF
>Mature_595_residues
TIYKAPVEDVSFLLNNVFHFDKYNNLPGFADAAPDVRDAIINEAARLSEQVLAPLNAVGDREGCVRHDDGSVTTPKGFKE
AYKQIAEGGWLGLSSPPEFGGQGLPVTLTQTVAEFQISANMAFSMYHGLTMGAAAALLVHGNAEQKALYLPKMTAGEWTG
TMNLTEPQCGTDLGLLRTKAVKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPAGIKGVSLFVVPKILVNADG
SLGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEENKGMQGMFVMMNEARLGVAVQGLAQSEVAYQNAVAYARER
LQGRALSGPKATDKPADPIIVHPDVRRVLLTIRAFNEAARALVMWTALKSDVAHRSDDAKERQIADDHLGLMTPVLKGVL
TDVGFSNAVLAQQVYGGHGYIAANGMEQFVRDARIAMIYEGANGIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHGGD
EAMKPFVTPLSTSLSHLQQATTWLMLNAMAAPDNAGAGATDYMQLFGLVACGYMWAKMAKVAQDKIAADGATPYLTTKLV
TGRFFAERTLPGTALHLARIQAGSGTVMELPAEAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=441, Percent_Identity=25.1700680272109, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI4501857, Length=388, Percent_Identity=27.5773195876289, Blast_Score=106, Evalue=8e-23,
Organism=Homo sapiens, GI4557233, Length=431, Percent_Identity=26.6821345707657, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI21361497, Length=435, Percent_Identity=25.0574712643678, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI226958412, Length=393, Percent_Identity=25.9541984732824, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI7656849, Length=384, Percent_Identity=27.8645833333333, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI226958414, Length=390, Percent_Identity=25.8974358974359, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI4557235, Length=380, Percent_Identity=25.7894736842105, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI76496475, Length=380, Percent_Identity=25.7894736842105, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI87082384, Length=333, Percent_Identity=30.3303303303303, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17508101, Length=432, Percent_Identity=25.2314814814815, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=409, Percent_Identity=26.4058679706601, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=282, Percent_Identity=28.0141843971631, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=434, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17506239, Length=366, Percent_Identity=23.7704918032787, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17569725, Length=437, Percent_Identity=25.629290617849, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=426, Percent_Identity=24.1784037558685, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI86563381, Length=351, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=351, Percent_Identity=25.9259259259259, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=284, Percent_Identity=26.056338028169, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=385, Percent_Identity=23.3766233766234, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17505929, Length=372, Percent_Identity=24.4623655913978, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=22.8813559322034, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17551932, Length=414, Percent_Identity=22.7053140096618, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21356377, Length=382, Percent_Identity=27.4869109947644, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281363737, Length=376, Percent_Identity=28.1914893617021, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24666513, Length=422, Percent_Identity=26.303317535545, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21355753, Length=390, Percent_Identity=25.6410256410256, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24646207, Length=387, Percent_Identity=26.0981912144703, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.3

Molecular weight: Translated: 63604; Mature: 63472

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYKAPVEDVSFLLNNVFHFDKYNNLPGFADAAPDVRDAIINEAARLSEQVLAPLNAVG
CCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
DREGCVRHDDGSVTTPKGFKEAYKQIAEGGWLGLSSPPEFGGQGLPVTLTQTVAEFQISA
CCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHC
NMAFSMYHGLTMGAAAALLVHGNAEQKALYLPKMTAGEWTGTMNLTEPQCGTDLGLLRTK
CHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AVKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPAGIKGVSLFVVPKILVNAD
HHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHEEECC
GSLGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEENKGMQGMFVMMNEARLGVA
CCCCCCCCEEECCCHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCE
VQGLAQSEVAYQNAVAYARERLQGRALSGPKATDKPADPIIVHPDVRRVLLTIRAFNEAA
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
RALVMWTALKSDVAHRSDDAKERQIADDHLGLMTPVLKGVLTDVGFSNAVLAQQVYGGHG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
YIAANGMEQFVRDARIAMIYEGANGIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHGG
EEEECHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
DEAMKPFVTPLSTSLSHLQQATTWLMLNAMAAPDNAGAGATDYMQLFGLVACGYMWAKMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KVAQDKIAADGATPYLTTKLVTGRFFAERTLPGTALHLARIQAGSGTVMELPAEAF
HHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCHHEEEEEEECCCCCEEECCCCCC
>Mature Secondary Structure 
TIYKAPVEDVSFLLNNVFHFDKYNNLPGFADAAPDVRDAIINEAARLSEQVLAPLNAVG
CEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
DREGCVRHDDGSVTTPKGFKEAYKQIAEGGWLGLSSPPEFGGQGLPVTLTQTVAEFQISA
CCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHC
NMAFSMYHGLTMGAAAALLVHGNAEQKALYLPKMTAGEWTGTMNLTEPQCGTDLGLLRTK
CHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AVKQADGSYKITGTKIFISAGEHDLSENIIHLVLARIEGAPAGIKGVSLFVVPKILVNAD
HHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHEEECC
GSLGARNGVMCGSIEHKMGIHGNATCTMNYDDATGWLIGEENKGMQGMFVMMNEARLGVA
CCCCCCCCEEECCCHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCE
VQGLAQSEVAYQNAVAYARERLQGRALSGPKATDKPADPIIVHPDVRRVLLTIRAFNEAA
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
RALVMWTALKSDVAHRSDDAKERQIADDHLGLMTPVLKGVLTDVGFSNAVLAQQVYGGHG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
YIAANGMEQFVRDARIAMIYEGANGIQALDLVGRKLPRDGGRAVMAFFAEVGAFAKEHGG
EEEECHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
DEAMKPFVTPLSTSLSHLQQATTWLMLNAMAAPDNAGAGATDYMQLFGLVACGYMWAKMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KVAQDKIAADGATPYLTTKLVTGRFFAERTLPGTALHLARIQAGSGTVMELPAEAF
HHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCHHEEEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]