Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86751666
Identifier: 86751666
GI number: 86751666
Start: 5167525
End: 5168115
Strand: Reverse
Name: 86751666
Synonym: RPB_4568
Alternate gene names: NA
Gene position: 5168115-5167525 (Counterclockwise)
Preceding gene: 86751667
Following gene: 86751665
Centisome position: 96.93
GC content: 68.19
Gene sequence:
>591_bases ATGACCCTTGCCACCCGCGATGCGATCTCCGCTCGCCCTGCGCCGCATCTGGCGCGACTTGCGGCGCTGTCCTTGATGGC CGGATTGTTCGCCGGTGGCGCATCGGCGCAGTCGCTGCCGGACAGCGAGAACGGCCGCTACACCTTCACGCCGAGCGCGG ACGGCGTGATGCGGCTCGACACCCGGACCGGCAAGGTCTCGACCTGCAGCGACAAGGGCAACGGCTGGGCCTGCTACGCG ATCGCCGACGAGCGTTCGGCGTTCGACGCCGAAATCGGCCGGCTGCAGGGCGACAACGACCGGCTGAAGCGAGAGGCCGA GGCGCTCCGGGTCGAGAACGACAATCTCAAGGCGCAGCTCGCGCAGCGCGGCCCCACCGTCTCCGGCAAGATCGACGAGT CGATGCCGAAGAGCGACAAGATGGCGACGCCGGAAGTCACCACCAAAGACGGCCAGCGCCGGCTCGAGATTCCGCTGCCG AGCGATCAGGATGTCGACCGGGTGATGGGGTTCATCGAGCGCGCCTGGCGGCGGCTGATCGAGATGGCCAACCGGATCCA GCGCGAAACCATCGGCGACGGCAAGACCTGA
Upstream 100 bases:
>100_bases ATTGCTGGCCGATGCGTTGAAATCCGGCCGCGGCCCGTACCGTCCGCCGGCCTGACACCCCATATAGGCCGGGTCCTTTT CTGTCAGGCGGAGCGTTCCG
Downstream 100 bases:
>100_bases GCAGGTTCTGGTCAGCGAGGTCCGCATGACTGCACCCCGCACGATGACGCGCGCGCCGGTGAGAGCAGCCTCGGTGACCC ACGTCGCCTCGTCGCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTLATRDAISARPAPHLARLAALSLMAGLFAGGASAQSLPDSENGRYTFTPSADGVMRLDTRTGKVSTCSDKGNGWACYA IADERSAFDAEIGRLQGDNDRLKREAEALRVENDNLKAQLAQRGPTVSGKIDESMPKSDKMATPEVTTKDGQRRLEIPLP SDQDVDRVMGFIERAWRRLIEMANRIQRETIGDGKT
Sequences:
>Translated_196_residues MTLATRDAISARPAPHLARLAALSLMAGLFAGGASAQSLPDSENGRYTFTPSADGVMRLDTRTGKVSTCSDKGNGWACYA IADERSAFDAEIGRLQGDNDRLKREAEALRVENDNLKAQLAQRGPTVSGKIDESMPKSDKMATPEVTTKDGQRRLEIPLP SDQDVDRVMGFIERAWRRLIEMANRIQRETIGDGKT >Mature_195_residues TLATRDAISARPAPHLARLAALSLMAGLFAGGASAQSLPDSENGRYTFTPSADGVMRLDTRTGKVSTCSDKGNGWACYAI ADERSAFDAEIGRLQGDNDRLKREAEALRVENDNLKAQLAQRGPTVSGKIDESMPKSDKMATPEVTTKDGQRRLEIPLPS DQDVDRVMGFIERAWRRLIEMANRIQRETIGDGKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21394; Mature: 21263
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLATRDAISARPAPHLARLAALSLMAGLFAGGASAQSLPDSENGRYTFTPSADGVMRLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEE TRTGKVSTCSDKGNGWACYAIADERSAFDAEIGRLQGDNDRLKREAEALRVENDNLKAQL CCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH AQRGPTVSGKIDESMPKSDKMATPEVTTKDGQRRLEIPLPSDQDVDRVMGFIERAWRRLI HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH EMANRIQRETIGDGKT HHHHHHHHHHCCCCCC >Mature Secondary Structure TLATRDAISARPAPHLARLAALSLMAGLFAGGASAQSLPDSENGRYTFTPSADGVMRLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEE TRTGKVSTCSDKGNGWACYAIADERSAFDAEIGRLQGDNDRLKREAEALRVENDNLKAQL CCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH AQRGPTVSGKIDESMPKSDKMATPEVTTKDGQRRLEIPLPSDQDVDRVMGFIERAWRRLI HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH EMANRIQRETIGDGKT HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA