Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86751667
Identifier: 86751667
GI number: 86751667
Start: 5168161
End: 5168784
Strand: Reverse
Name: 86751667
Synonym: RPB_4569
Alternate gene names: NA
Gene position: 5168784-5168161 (Counterclockwise)
Preceding gene: 86751673
Following gene: 86751666
Centisome position: 96.95
GC content: 66.99
Gene sequence:
>624_bases ATGTCGCGTCAGATCGACTACTATTTCTCGTTCCAGTCGCCCTGGGCCTATATCGGCCACAAGGCGTTCCGACAGCTTGT CGAAGCGCACGACCTCGCGGTCGTCTACAAGCCGGTGCTGCTGGCTGGGCTGTTCTCCGAAACCGGCGGCCTGCCGCTCG CCAAGCGTCATCCGGCGCGGCAGCGCTATCGGCTGGTCGAATTGCAGCGCTGGCGCGACAAGCGCGGGCTGGATTTCAAA TTGTGGCCGAAGCACTGGCCGTTCGATGCCCGTCTCGCCGATGGCGTGGTGCTGGCCGCGCTGGCGGCCGGGCTCGATCC CGAACCCTATCTGCAACGGGCCTATCCTGCGGTGTGGGAGCAGGAACTCGATCTCGCGGATGTCGCCGTCGTGACGCGCC TCGCCGACGAGGCCGGCCTGCCGGGCGAAAAGCTGGCGGCGCACGCGGCGTCGGATCAGATCCGCGCCGCCTATGAGCAG AACCGCCACGACGCGATGGCCGCGGATGTGTTCGGCTCGCCGGCCTATGTGCTCGACGGCGAAGTGTTCTGGGGACAGGA CCGGATCGAATTGCTGGCCGATGCGTTGAAATCCGGCCGCGGCCCGTACCGTCCGCCGGCCTGA
Upstream 100 bases:
>100_bases AGGTTCGGCTTGCACCGGCCGACAGCCTCTGATCCGATGCGGCCAATTTCGGCGACTCGTTCGCATCGAGCGTTTCGATA TTCCATCAGCCGGAGTACGC
Downstream 100 bases:
>100_bases CACCCCATATAGGCCGGGTCCTTTTCTGTCAGGCGGAGCGTTCCGATGACCCTTGCCACCCGCGATGCGATCTCCGCTCG CCCTGCGCCGCATCTGGCGC
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: 2-Hydroxychromene-2-Carboxylate Isomerase; Dsba Oxidoreductase; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; DSBA Family Oxidoreductase; DSBA-Like Thioredoxin Domain-Containing; DSBA-Like Thioredoxin Domain; DSBA-Like Thioredoxin Domain Protein; Thioredoxin Oxidoreductase; 2-Hydroxychromene-2-Carboxylate Isomerase Protein; Thioredoxin
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSRQIDYYFSFQSPWAYIGHKAFRQLVEAHDLAVVYKPVLLAGLFSETGGLPLAKRHPARQRYRLVELQRWRDKRGLDFK LWPKHWPFDARLADGVVLAALAAGLDPEPYLQRAYPAVWEQELDLADVAVVTRLADEAGLPGEKLAAHAASDQIRAAYEQ NRHDAMAADVFGSPAYVLDGEVFWGQDRIELLADALKSGRGPYRPPA
Sequences:
>Translated_207_residues MSRQIDYYFSFQSPWAYIGHKAFRQLVEAHDLAVVYKPVLLAGLFSETGGLPLAKRHPARQRYRLVELQRWRDKRGLDFK LWPKHWPFDARLADGVVLAALAAGLDPEPYLQRAYPAVWEQELDLADVAVVTRLADEAGLPGEKLAAHAASDQIRAAYEQ NRHDAMAADVFGSPAYVLDGEVFWGQDRIELLADALKSGRGPYRPPA >Mature_206_residues SRQIDYYFSFQSPWAYIGHKAFRQLVEAHDLAVVYKPVLLAGLFSETGGLPLAKRHPARQRYRLVELQRWRDKRGLDFKL WPKHWPFDARLADGVVLAALAAGLDPEPYLQRAYPAVWEQELDLADVAVVTRLADEAGLPGEKLAAHAASDQIRAAYEQN RHDAMAADVFGSPAYVLDGEVFWGQDRIELLADALKSGRGPYRPPA
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23282; Mature: 23150
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQIDYYFSFQSPWAYIGHKAFRQLVEAHDLAVVYKPVLLAGLFSETGGLPLAKRHPAR CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHH QRYRLVELQRWRDKRGLDFKLWPKHWPFDARLADGVVLAALAAGLDPEPYLQRAYPAVWE HHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH QELDLADVAVVTRLADEAGLPGEKLAAHAASDQIRAAYEQNRHDAMAADVFGSPAYVLDG HCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECC EVFWGQDRIELLADALKSGRGPYRPPA EEEECCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SRQIDYYFSFQSPWAYIGHKAFRQLVEAHDLAVVYKPVLLAGLFSETGGLPLAKRHPAR CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHH QRYRLVELQRWRDKRGLDFKLWPKHWPFDARLADGVVLAALAAGLDPEPYLQRAYPAVWE HHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH QELDLADVAVVTRLADEAGLPGEKLAAHAASDQIRAAYEQNRHDAMAADVFGSPAYVLDG HCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECC EVFWGQDRIELLADALKSGRGPYRPPA EEEECCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA