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The map label for this gene is cssR [H]

Identifier: 86751613

GI number: 86751613

Start: 5102764

End: 5103123

Strand: Reverse

Name: cssR [H]

Synonym: RPB_4515

Alternate gene names: 86751613

Gene position: 5103123-5102764 (Counterclockwise)

Preceding gene: 86751616

Following gene: 86751611

Centisome position: 95.71

GC content: 58.33

Gene sequence:

>360_bases
ATGCACAAGATTCTCCTCGCCGAAGACGACAACGACATGCGCCGGTTCCTGGTGAAGGCGCTGGAAAACGCCGGATTTCA
GGTGTCCTCCTTCGACAACGGCATGTCGGCCTATCAGCGGTTGCGCGAAGAGCCCTTCGAGATGCTGCTGACCGACATCG
TGATGCCGGAGATGGACGGCATCGAACTGGCTCGGCGCGCTTCGGAACTCGACCCCGACATCAAGATCATGTTCATCACC
GGTTTTGCCGCGGTGGCGCTGAATTCGGATTCGGAAGCGCCGAAAAACGCCAAGGTCCTGTCCAAGCCCGTGCATCTGCG
CGAATTGGTCAGCGAAGTGAACAAGATGTTGGCCGCCTAA

Upstream 100 bases:

>100_bases
TTTGACCTGCGAAAGGCCCGCGGCGGAAACTTCACCCGAAATTTACCGAGACGCCGTCTAACTGAATCGTAGTTCTCCGA
TCCGGATTGAAGCCAGCCCC

Downstream 100 bases:

>100_bases
TTCCTTCTTTCGCGTCCTTGCCTAGCTCCTCAGGAGCCGATATAGGGACGCGTCCCGACTTCGACGGCGTTTAGGGCGCG
TAGCTCAGCGGGAGAGCACC

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MHKILLAEDDNDMRRFLVKALENAGFQVSSFDNGMSAYQRLREEPFEMLLTDIVMPEMDGIELARRASELDPDIKIMFIT
GFAAVALNSDSEAPKNAKVLSKPVHLRELVSEVNKMLAA

Sequences:

>Translated_119_residues
MHKILLAEDDNDMRRFLVKALENAGFQVSSFDNGMSAYQRLREEPFEMLLTDIVMPEMDGIELARRASELDPDIKIMFIT
GFAAVALNSDSEAPKNAKVLSKPVHLRELVSEVNKMLAA
>Mature_119_residues
MHKILLAEDDNDMRRFLVKALENAGFQVSSFDNGMSAYQRLREEPFEMLLTDIVMPEMDGIELARRASELDPDIKIMFIT
GFAAVALNSDSEAPKNAKVLSKPVHLRELVSEVNKMLAA

Specific function: Member of the two-component regulatory system CssS/CssR required to control the cellular response to secretion stress [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13369; Mature: 13369

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKILLAEDDNDMRRFLVKALENAGFQVSSFDNGMSAYQRLREEPFEMLLTDIVMPEMDG
CCCEEEECCCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
IELARRASELDPDIKIMFITGFAAVALNSDSEAPKNAKVLSKPVHLRELVSEVNKMLAA
HHHHHHHHHCCCCEEEEEEECCHHEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHKILLAEDDNDMRRFLVKALENAGFQVSSFDNGMSAYQRLREEPFEMLLTDIVMPEMDG
CCCEEEECCCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
IELARRASELDPDIKIMFITGFAAVALNSDSEAPKNAKVLSKPVHLRELVSEVNKMLAA
HHHHHHHHHCCCCEEEEEEECCHHEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9639930; 9384377; 11555295 [H]