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The map label for this gene is yagS [H]

Identifier: 86751610

GI number: 86751610

Start: 5100183

End: 5101169

Strand: Reverse

Name: yagS [H]

Synonym: RPB_4512

Alternate gene names: 86751610

Gene position: 5101169-5100183 (Counterclockwise)

Preceding gene: 86751611

Following gene: 86751609

Centisome position: 95.68

GC content: 70.42

Gene sequence:

>987_bases
ATGACTCCTTTCGATTATTCCCGGGCCGGCGATGTCGCCGAAGCGCTGCGGGCCGGCGCCGGCGTGCAGACCAAGTTTCT
CGGCGGCGGCACCAATCTGATCGACCTGATGCGGGAAACGATCGAGCGCCCGGCGGCGCTGGTCGATATCACCGGTCTGC
CGGCCGAGATCACCGCGCGCGACGACGGCGGCCTGCTGATCGGCGCGGCGGTGCGCAACACCGCGCTGGCCGAGCACCGC
GCCGTGCGGACGCGCTATCCGATGCTGTCGCGCGCCATTCTGGCGGGCGCCTCGGCGCAGATCCGCAACATGGCGACGGT
CGGCGGCAATCTGCTGCAGCGGACGCGCTGCGCTTACTTCTACGACGATGCCGGCTCGCGCTGTAACAAGCGCCAACCGG
GGCAAGGCTGCGATGCCATCGACGGCTTCAACCGCAACCACGCCATCCTCGGCGCGTCGGAGTCGTGCGTGGCGACGCAT
CCGTCGGACATGTGCGTGGCGCTCGCCGCGCTCGATGCGGTGGTGCATCTCGCCGGCAGCGGCGGCCAGCGCACGTTGCC
GTTCAACGACGTCCATCGGCTGCCGGGCGATCGGCCGGACCTCGAAACCATGCTGCGGCCCGGCGAACTGATCACCGCGA
TCGAACTGCCGGCGCAGCCGATCGCGGCGCGCTCGACCTATCGCAAGGTGCGCGACCGCTCGAGCTACGCGTTCGCGCTG
GTCTCGGTCGCGGCCGCGGTGGAGGTCGAGCGCGGCAGCGTCAAGGATTTGCGGCTGGCGCTCGGCGGCGTCGCGCACAA
GCCGTGGCGCGCGCACAAGGCCGAGCAGGCGCTGCGCGGCGGTCCCGCCACGGTCGAGGCGTTTCGCGCCGCGGCCGAGG
CCGAACTCGCCGACGCCGTGCCGCTTCGCGACAACGGCTTCAAGATCGAACTGGCAAAGCGCACCATTATTGCCGTGCTC
GGCGAACTGGCAGGAGTGGCCCGATGA

Upstream 100 bases:

>100_bases
ACGACGAAGTCCGCGAGCGGATGAGCGGCAATCTGTGCCGCTGCGGCGCGCACAACGGCATCATCGATGCGATCAGCGAA
ACCTATGCGGAGGCTGCGGA

Downstream 100 bases:

>100_bases
GGATCGCGGAAGAAACCAAGCAGGCCATGCGCGGCGCGATGCAAGGCGCGATGGAGAAGGTGATCGCGCTGGCGCCCGAC
AGCTGGATGCCGGGCGGCCA

Product: molybdopterin dehydrogenase, FAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTPFDYSRAGDVAEALRAGAGVQTKFLGGGTNLIDLMRETIERPAALVDITGLPAEITARDDGGLLIGAAVRNTALAEHR
AVRTRYPMLSRAILAGASAQIRNMATVGGNLLQRTRCAYFYDDAGSRCNKRQPGQGCDAIDGFNRNHAILGASESCVATH
PSDMCVALAALDAVVHLAGSGGQRTLPFNDVHRLPGDRPDLETMLRPGELITAIELPAQPIAARSTYRKVRDRSSYAFAL
VSVAAAVEVERGSVKDLRLALGGVAHKPWRAHKAEQALRGGPATVEAFRAAAEAELADAVPLRDNGFKIELAKRTIIAVL
GELAGVAR

Sequences:

>Translated_328_residues
MTPFDYSRAGDVAEALRAGAGVQTKFLGGGTNLIDLMRETIERPAALVDITGLPAEITARDDGGLLIGAAVRNTALAEHR
AVRTRYPMLSRAILAGASAQIRNMATVGGNLLQRTRCAYFYDDAGSRCNKRQPGQGCDAIDGFNRNHAILGASESCVATH
PSDMCVALAALDAVVHLAGSGGQRTLPFNDVHRLPGDRPDLETMLRPGELITAIELPAQPIAARSTYRKVRDRSSYAFAL
VSVAAAVEVERGSVKDLRLALGGVAHKPWRAHKAEQALRGGPATVEAFRAAAEAELADAVPLRDNGFKIELAKRTIIAVL
GELAGVAR
>Mature_327_residues
TPFDYSRAGDVAEALRAGAGVQTKFLGGGTNLIDLMRETIERPAALVDITGLPAEITARDDGGLLIGAAVRNTALAEHRA
VRTRYPMLSRAILAGASAQIRNMATVGGNLLQRTRCAYFYDDAGSRCNKRQPGQGCDAIDGFNRNHAILGASESCVATHP
SDMCVALAALDAVVHLAGSGGQRTLPFNDVHRLPGDRPDLETMLRPGELITAIELPAQPIAARSTYRKVRDRSSYAFALV
SVAAAVEVERGSVKDLRLALGGVAHKPWRAHKAEQALRGGPATVEAFRAAAEAELADAVPLRDNGFKIELAKRTIIAVLG
ELAGVAR

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=325, Percent_Identity=51.6923076923077, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1789231, Length=326, Percent_Identity=28.5276073619632, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 34750; Mature: 34619

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFDYSRAGDVAEALRAGAGVQTKFLGGGTNLIDLMRETIERPAALVDITGLPAEITAR
CCCCCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEC
DDGGLLIGAAVRNTALAEHRAVRTRYPMLSRAILAGASAQIRNMATVGGNLLQRTRCAYF
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEE
YDDAGSRCNKRQPGQGCDAIDGFNRNHAILGASESCVATHPSDMCVALAALDAVVHLAGS
ECCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCC
GGQRTLPFNDVHRLPGDRPDLETMLRPGELITAIELPAQPIAARSTYRKVRDRSSYAFAL
CCCCCCCHHHHHHCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHH
VSVAAAVEVERGSVKDLRLALGGVAHKPWRAHKAEQALRGGPATVEAFRAAAEAELADAV
HHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PLRDNGFKIELAKRTIIAVLGELAGVAR
CCCCCCEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPFDYSRAGDVAEALRAGAGVQTKFLGGGTNLIDLMRETIERPAALVDITGLPAEITAR
CCCCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEC
DDGGLLIGAAVRNTALAEHRAVRTRYPMLSRAILAGASAQIRNMATVGGNLLQRTRCAYF
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEE
YDDAGSRCNKRQPGQGCDAIDGFNRNHAILGASESCVATHPSDMCVALAALDAVVHLAGS
ECCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCC
GGQRTLPFNDVHRLPGDRPDLETMLRPGELITAIELPAQPIAARSTYRKVRDRSSYAFAL
CCCCCCCHHHHHHCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHH
VSVAAAVEVERGSVKDLRLALGGVAHKPWRAHKAEQALRGGPATVEAFRAAAEAELADAV
HHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PLRDNGFKIELAKRTIIAVLGELAGVAR
CCCCCCEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]