Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is phnI [H]
Identifier: 86751199
GI number: 86751199
Start: 4661320
End: 4662426
Strand: Direct
Name: phnI [H]
Synonym: RPB_4091
Alternate gene names: 86751199
Gene position: 4661320-4662426 (Clockwise)
Preceding gene: 86751198
Following gene: 86751200
Centisome position: 87.43
GC content: 67.93
Gene sequence:
>1107_bases ATGTATGTCGCCGTCAAGGGTGGCGAGCGCGCCATCGACAACGCCCACCGGCTGCTGGCGCACGAGCGCCGCGGCGACCG CGCCGTGCCTGAACTGACACTGGCGCAGATTTCCGAACAGCTCGCGCTCGGCGTCGACCGGGTGATGGTCGAGGGCTCGC TGTATGACCGCGAGTTGGCGGCACTCGCCATCAAGCAGGCCCGCGGCGATCTGATCGAGGCGATCTTCCTGCTGCGCGCA TTCCGCGCCACGCTGCCCCGGTTCGGCGCCACCGAACCGCTCGACACCGGCGCGATGGCGGTGCGGCGGCGGGTGTCCTC GACCTTCAAGGATATTCCCGGCGGGCAGATTCTCGGACCGACCTTCGACTACACCCATCGGCTGCTCGATCCGCAACTCG CCGCAGGCGGCGAGCCGGATCAGCCGGTCAATGCGGAGGTGTCGAACGAAGCGATGCCGCGCGTCACCGATATCCTCGGC CGCGACGGACTGATCGAGCCGTCGCCCGCGCCGGCCCCCGATGCGCCGGTCGGCGACCTCACCCGCGAGCCGCTGAACTT TCCGGCGGATCGCGATCTGCGGCTGCAAAATCTGGCGCGCGGCGACGAGGGCTTCCTGCTCGCGCTCGGCTACTCGACGC AGCGTGGCTATGGCCGCTCGCATCCGTTCGCCGGCGAAATCCGCTTCGGCGAAGTCGAACTGGAGTTCGTCGCCGAGGAC GTCGGCTTCGCGGTGCCGCTCGGCAGCATCGCGCTGACAGAATGCCAGATGGTCAATCAGTTCAAGGGTTCGGCCACAGA GCCGCCCTGCTTCACCCGCGGCTACGGCCTCGCCTTCGGGCAGAGCGAGCGCAAGACCATGGCGATGGCGCTGGTCGATC GTGCGCTCCGCGCCAAGGAACTCGGCGAGGAGGCGCTGGCGCCGGCGCAGGACGAGGAATTCGTGCTGTCGCATTCCGAC AATGTGCAGGCGACCGGCTTCGTCGAACATCTGAAGCTGCCGCATTATGTCGACTTCCAGTCCGAGCTCGGACTGATCCG CCGGCTGCGGCAGGATTTTGCCGATGCCGCCGAGCAAGCGGATGCGTTGCGGGAGGCCGCGGAATGA
Upstream 100 bases:
>100_bases ACGTCCTGTTTCCGCGCGGCATCGATCTGATCCTGGTCTCGGGCCCTGCGATGATCGCGATCCCGCGCACCACGCGGCTC GTCGCCAAGGGAGGCAACTG
Downstream 100 bases:
>100_bases ACGCGCCACAATACAACTTCGCCTATCTCGACGAGCAGACCAAGCGGATGATCCGCCGCGCGATCCTGAAGGCGATCGCG ATCCCCGGCTATCAGGTGCC
Product: phosphonate metabolism
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MYVAVKGGERAIDNAHRLLAHERRGDRAVPELTLAQISEQLALGVDRVMVEGSLYDRELAALAIKQARGDLIEAIFLLRA FRATLPRFGATEPLDTGAMAVRRRVSSTFKDIPGGQILGPTFDYTHRLLDPQLAAGGEPDQPVNAEVSNEAMPRVTDILG RDGLIEPSPAPAPDAPVGDLTREPLNFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRSHPFAGEIRFGEVELEFVAED VGFAVPLGSIALTECQMVNQFKGSATEPPCFTRGYGLAFGQSERKTMAMALVDRALRAKELGEEALAPAQDEEFVLSHSD NVQATGFVEHLKLPHYVDFQSELGLIRRLRQDFADAAEQADALREAAE
Sequences:
>Translated_368_residues MYVAVKGGERAIDNAHRLLAHERRGDRAVPELTLAQISEQLALGVDRVMVEGSLYDRELAALAIKQARGDLIEAIFLLRA FRATLPRFGATEPLDTGAMAVRRRVSSTFKDIPGGQILGPTFDYTHRLLDPQLAAGGEPDQPVNAEVSNEAMPRVTDILG RDGLIEPSPAPAPDAPVGDLTREPLNFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRSHPFAGEIRFGEVELEFVAED VGFAVPLGSIALTECQMVNQFKGSATEPPCFTRGYGLAFGQSERKTMAMALVDRALRAKELGEEALAPAQDEEFVLSHSD NVQATGFVEHLKLPHYVDFQSELGLIRRLRQDFADAAEQADALREAAE >Mature_368_residues MYVAVKGGERAIDNAHRLLAHERRGDRAVPELTLAQISEQLALGVDRVMVEGSLYDRELAALAIKQARGDLIEAIFLLRA FRATLPRFGATEPLDTGAMAVRRRVSSTFKDIPGGQILGPTFDYTHRLLDPQLAAGGEPDQPVNAEVSNEAMPRVTDILG RDGLIEPSPAPAPDAPVGDLTREPLNFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRSHPFAGEIRFGEVELEFVAED VGFAVPLGSIALTECQMVNQFKGSATEPPCFTRGYGLAFGQSERKTMAMALVDRALRAKELGEEALAPAQDEEFVLSHSD NVQATGFVEHLKLPHYVDFQSELGLIRRLRQDFADAAEQADALREAAE
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=354, Percent_Identity=61.2994350282486, Blast_Score=430, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 40162; Mature: 40162
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGERAIDNAHRLLAHERRGDRAVPELTLAQISEQLALGVDRVMVEGSLYDRELA CEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ALAIKQARGDLIEAIFLLRAFRATLPRFGATEPLDTGAMAVRRRVSSTFKDIPGGQILGP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECC TFDYTHRLLDPQLAAGGEPDQPVNAEVSNEAMPRVTDILGRDGLIEPSPAPAPDAPVGDL CHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC TREPLNFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRSHPFAGEIRFGEVELEFVAED CCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCEEEEEHHHH VGFAVPLGSIALTECQMVNQFKGSATEPPCFTRGYGLAFGQSERKTMAMALVDRALRAKE HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LGEEALAPAQDEEFVLSHSDNVQATGFVEHLKLPHYVDFQSELGLIRRLRQDFADAAEQA HHHHHCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DALREAAE HHHHHHCC >Mature Secondary Structure MYVAVKGGERAIDNAHRLLAHERRGDRAVPELTLAQISEQLALGVDRVMVEGSLYDRELA CEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ALAIKQARGDLIEAIFLLRAFRATLPRFGATEPLDTGAMAVRRRVSSTFKDIPGGQILGP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECC TFDYTHRLLDPQLAAGGEPDQPVNAEVSNEAMPRVTDILGRDGLIEPSPAPAPDAPVGDL CHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC TREPLNFPADRDLRLQNLARGDEGFLLALGYSTQRGYGRSHPFAGEIRFGEVELEFVAED CCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCEEEEEHHHH VGFAVPLGSIALTECQMVNQFKGSATEPPCFTRGYGLAFGQSERKTMAMALVDRALRAKE HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LGEEALAPAQDEEFVLSHSDNVQATGFVEHLKLPHYVDFQSELGLIRRLRQDFADAAEQA HHHHHCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DALREAAE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]