| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is ygcG [H]
Identifier: 86751063
GI number: 86751063
Start: 4513638
End: 4514546
Strand: Reverse
Name: ygcG [H]
Synonym: RPB_3955
Alternate gene names: 86751063
Gene position: 4514546-4513638 (Counterclockwise)
Preceding gene: 86751064
Following gene: 86751062
Centisome position: 84.67
GC content: 68.32
Gene sequence:
>909_bases ATGATGCGGATGGCGCGGGCCTCGGTGCTCGCGGCGCTGATGTGCTGGCTGGTCGTGGGTTTCACCACGATCGCACAGGC GCAGCTCGCGGTGCCGCAGCTCACCGGCCGCGTCGTCGATCAGACCGGCACGCTCGACAGCGACGTGATCGCGCGGCTCG ACCAGAAGCTGAAGGCGTTCGAGGCCCGCAAAGGCAGCCAGATCGCGGTGCTGATCGTGCCGACGACGCAGCCCGAAGCG ATCGAGCCATTTGCGATAAGGGTGGCCGAGGCCTGGAAGATCGGCCGCAAAAAGGTCGACGACGGCGCCATCCTGCTGGT CGCCAAGAACGACCGCAAGCTGCGGATCGAGGTCGGCTACGGCCTCGAAGGCGCGCTGCCCGACGTCACGGCCAAGCGCA TCATCGACGAGATCATCACGCCGAAATTCAGGACCGGCGATTTCGCCGGCGGCATCGAGGCCGGCGTCGACCGCATGATC GCCGTGATCGACGGCGAGGCGCTGCCGGCGCCCGAGCCGCAACATGAATGGTCGCCGGAATCGTTCGATCAGGTTAGCGG CTGGGCGATCCCGCTGATCTTCGGTACGCTGGTGGTGAACGGTTTCCTGCAGAGCCTGCTCGGCCGCATGGCCGCCTCGG CGCTGACCGGCAGCATCATCGGCGGCGTCGCCTGGATGTTCGGGCTCGGCTTTCCGATCGCGATGATCGTCGGCTTCGCG GCGTTCTTGTTCGCGCTGTTCATCGATTTGTTCAGCGGGGGCGGACCAGGGATCGGTTCCGGCCGCCGCAGCGGCGGCAT CTATCCCGGCGGCGCGTGGTCGGGCGGCTCGCGCGGCTCGAGCAGCAGCGGCGGCTTCAGCGGCGGGGGCGGCAGCTTCG GTGGCGGCGGCGCTTCGGGGAGTTGGTGA
Upstream 100 bases:
>100_bases CTTCACGGTCGAGAACGAGGGCGCGATCTCGACCGCGCCCAAGGTCGACTTCAACACGGCCCCGGCCCCGGCGAAGTAAA TGCGCGCGGAGCGCGTGGCG
Downstream 100 bases:
>100_bases GCGGGGAGACGGCGATGGGCATCCGGCGGATCAGCAAACATCTGTTCACCAGCCGCGGGCTGGTGCAGAAGGCGTTTCCG CCGTCGGCGCTCGATGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MMRMARASVLAALMCWLVVGFTTIAQAQLAVPQLTGRVVDQTGTLDSDVIARLDQKLKAFEARKGSQIAVLIVPTTQPEA IEPFAIRVAEAWKIGRKKVDDGAILLVAKNDRKLRIEVGYGLEGALPDVTAKRIIDEIITPKFRTGDFAGGIEAGVDRMI AVIDGEALPAPEPQHEWSPESFDQVSGWAIPLIFGTLVVNGFLQSLLGRMAASALTGSIIGGVAWMFGLGFPIAMIVGFA AFLFALFIDLFSGGGPGIGSGRRSGGIYPGGAWSGGSRGSSSSGGFSGGGGSFGGGGASGSW
Sequences:
>Translated_302_residues MMRMARASVLAALMCWLVVGFTTIAQAQLAVPQLTGRVVDQTGTLDSDVIARLDQKLKAFEARKGSQIAVLIVPTTQPEA IEPFAIRVAEAWKIGRKKVDDGAILLVAKNDRKLRIEVGYGLEGALPDVTAKRIIDEIITPKFRTGDFAGGIEAGVDRMI AVIDGEALPAPEPQHEWSPESFDQVSGWAIPLIFGTLVVNGFLQSLLGRMAASALTGSIIGGVAWMFGLGFPIAMIVGFA AFLFALFIDLFSGGGPGIGSGRRSGGIYPGGAWSGGSRGSSSSGGFSGGGGSFGGGGASGSW >Mature_302_residues MMRMARASVLAALMCWLVVGFTTIAQAQLAVPQLTGRVVDQTGTLDSDVIARLDQKLKAFEARKGSQIAVLIVPTTQPEA IEPFAIRVAEAWKIGRKKVDDGAILLVAKNDRKLRIEVGYGLEGALPDVTAKRIIDEIITPKFRTGDFAGGIEAGVDRMI AVIDGEALPAPEPQHEWSPESFDQVSGWAIPLIFGTLVVNGFLQSLLGRMAASALTGSIIGGVAWMFGLGFPIAMIVGFA AFLFALFIDLFSGGGPGIGSGRRSGGIYPGGAWSGGSRGSSSSGGFSGGGGSFGGGGASGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=145, Percent_Identity=40.6896551724138, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 31346; Mature: 31346
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRMARASVLAALMCWLVVGFTTIAQAQLAVPQLTGRVVDQTGTLDSDVIARLDQKLKAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EARKGSQIAVLIVPTTQPEAIEPFAIRVAEAWKIGRKKVDDGAILLVAKNDRKLRIEVGY HHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECC GLEGALPDVTAKRIIDEIITPKFRTGDFAGGIEAGVDRMIAVIDGEALPAPEPQHEWSPE CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEHEECCCCCCCCCCCCCCCCC SFDQVSGWAIPLIFGTLVVNGFLQSLLGRMAASALTGSIIGGVAWMFGLGFPIAMIVGFA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AFLFALFIDLFSGGGPGIGSGRRSGGIYPGGAWSGGSRGSSSSGGFSGGGGSFGGGGASG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SW CC >Mature Secondary Structure MMRMARASVLAALMCWLVVGFTTIAQAQLAVPQLTGRVVDQTGTLDSDVIARLDQKLKAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EARKGSQIAVLIVPTTQPEAIEPFAIRVAEAWKIGRKKVDDGAILLVAKNDRKLRIEVGY HHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECC GLEGALPDVTAKRIIDEIITPKFRTGDFAGGIEAGVDRMIAVIDGEALPAPEPQHEWSPE CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEHEECCCCCCCCCCCCCCCCC SFDQVSGWAIPLIFGTLVVNGFLQSLLGRMAASALTGSIIGGVAWMFGLGFPIAMIVGFA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AFLFALFIDLFSGGGPGIGSGRRSGGIYPGGAWSGGSRGSSSSGGFSGGGGSFGGGGASG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SW CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]