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The map label for this gene is lemA [H]

Identifier: 86751064

GI number: 86751064

Start: 4514568

End: 4515176

Strand: Reverse

Name: lemA [H]

Synonym: RPB_3956

Alternate gene names: 86751064

Gene position: 4515176-4514568 (Counterclockwise)

Preceding gene: 86751065

Following gene: 86751063

Centisome position: 84.69

GC content: 62.73

Gene sequence:

>609_bases
ATGCGGAAGTTTCTGACGGTGCTGGCGGCGCTTGCCACGCTGAGCCTGACCAATTGCGGCTACAATGCCATCCAGAGCGA
AGACCAGGAGGTCAAGGCGACCTGGTCGGAGGTGGTCAACCAGTATCAGCGCCGCGCCGATCTGGTGCCGAACCTCGTCA
ACTCGGTGAAGGGCTTCGCGCAGCAGGAAAAAGACGTGCTGCTCGGCGTCACCAACGCCCGAGCCAAGGTCGGCAGCGTG
CAGGCCACGCCCGAGGTGCTGAACGATCCGGCCGCCTTCCAGAAGTTCCAGCAGGCGCAAGGGGAACTCTCCAGCGCGCT
GTCGCGGCTGCTGGTGGTGACCGAGAACTATCCGCAGCTCAAATCCGACGCGCTGTTCACCAATTTGATGGCGCAGCTCG
AAGGCACCGAGAACCGCATCACCGTGGCGCGCAACCGCTATATCAAGGCGGTGCAGGCCTATAACGTCACGGTGCGCTCG
GTGCCGACCAACTTCACCGCAATGATGTTCGGCTACAAGGAAAAGCCGAACTTCACGGTCGAGAACGAGGGCGCGATCTC
GACCGCGCCCAAGGTCGACTTCAACACGGCCCCGGCCCCGGCGAAGTAA

Upstream 100 bases:

>100_bases
TGTTCGCTCTGAGCCGCTTTAGAACCATATCGGCCCAACAACCGACAAACCTGTCGCCCGGCGCATGCTATGCTGCGCCG
GTTCGCCCGGGGAGAGATCG

Downstream 100 bases:

>100_bases
ATGCGCGCGGAGCGCGTGGCGATGATGCGGATGGCGCGGGCCTCGGTGCTCGCGGCGCTGATGTGCTGGCTGGTCGTGGG
TTTCACCACGATCGCACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRKFLTVLAALATLSLTNCGYNAIQSEDQEVKATWSEVVNQYQRRADLVPNLVNSVKGFAQQEKDVLLGVTNARAKVGSV
QATPEVLNDPAAFQKFQQAQGELSSALSRLLVVTENYPQLKSDALFTNLMAQLEGTENRITVARNRYIKAVQAYNVTVRS
VPTNFTAMMFGYKEKPNFTVENEGAISTAPKVDFNTAPAPAK

Sequences:

>Translated_202_residues
MRKFLTVLAALATLSLTNCGYNAIQSEDQEVKATWSEVVNQYQRRADLVPNLVNSVKGFAQQEKDVLLGVTNARAKVGSV
QATPEVLNDPAAFQKFQQAQGELSSALSRLLVVTENYPQLKSDALFTNLMAQLEGTENRITVARNRYIKAVQAYNVTVRS
VPTNFTAMMFGYKEKPNFTVENEGAISTAPKVDFNTAPAPAK
>Mature_202_residues
MRKFLTVLAALATLSLTNCGYNAIQSEDQEVKATWSEVVNQYQRRADLVPNLVNSVKGFAQQEKDVLLGVTNARAKVGSV
QATPEVLNDPAAFQKFQQAQGELSSALSRLLVVTENYPQLKSDALFTNLMAQLEGTENRITVARNRYIKAVQAYNVTVRS
VPTNFTAMMFGYKEKPNFTVENEGAISTAPKVDFNTAPAPAK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22193; Mature: 22193

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLTVLAALATLSLTNCGYNAIQSEDQEVKATWSEVVNQYQRRADLVPNLVNSVKGFA
CHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQEKDVLLGVTNARAKVGSVQATPEVLNDPAAFQKFQQAQGELSSALSRLLVVTENYPQL
HHCCCEEEEECCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
KSDALFTNLMAQLEGTENRITVARNRYIKAVQAYNVTVRSVPTNFTAMMFGYKEKPNFTV
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCEEEEECCCCHHHHEECCCCCCCEEE
ENEGAISTAPKVDFNTAPAPAK
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKFLTVLAALATLSLTNCGYNAIQSEDQEVKATWSEVVNQYQRRADLVPNLVNSVKGFA
CHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQEKDVLLGVTNARAKVGSVQATPEVLNDPAAFQKFQQAQGELSSALSRLLVVTENYPQL
HHCCCEEEEECCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
KSDALFTNLMAQLEGTENRITVARNRYIKAVQAYNVTVRSVPTNFTAMMFGYKEKPNFTV
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCEEEEECCCCHHHHEECCCCCCCEEE
ENEGAISTAPKVDFNTAPAPAK
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]