| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ygcG [C]
Identifier: 86751062
GI number: 86751062
Start: 4513126
End: 4513623
Strand: Reverse
Name: ygcG [C]
Synonym: RPB_3954
Alternate gene names: 86751062
Gene position: 4513623-4513126 (Counterclockwise)
Preceding gene: 86751063
Following gene: 86751060
Centisome position: 84.66
GC content: 68.07
Gene sequence:
>498_bases ATGGGCATCCGGCGGATCAGCAAACATCTGTTCACCAGCCGCGGGCTGGTGCAGAAGGCGTTTCCGCCGTCGGCGCTCGA TGCCATCGAGCGCGCGATCGGCGCCAGCGAAGCGCGGCACGCCGGGCAGATCCGGTTCGTGGTGGAAGGCGCGCTCGACG GCGCGCCTTTGTTCCGCGACCAGCCGGCGCGCGAGCGCGCGCTCGACGTGTTCTCGCAATTGCGGATCTGGGACACCGAG CACAATAACGGCGTGCTGATCTATCTGTTGCTCGCCGATCGCGACGTCGAGATCGTCGCCGACCGCGGCATCGACGGCCG GGTCGACGCGGCGGCGTGGGAGGACATCTGCCGCGAGATGGAAAGCGCCTTCCGCCAGGGCCGCTTCGAAGCCGGCGTGC TGCGCGGCATCGAACTGATCACCGCGCATTTGGCGGCGCATTTTCCGAAAGACAGCGGCGGCGACAACGAACTGCCCGAC GCGCCGGTCGTGGTCTGA
Upstream 100 bases:
>100_bases GCGGCTCGCGCGGCTCGAGCAGCAGCGGCGGCTTCAGCGGCGGGGGCGGCAGCTTCGGTGGCGGCGGCGCTTCGGGGAGT TGGTGAGCGGGGAGACGGCG
Downstream 100 bases:
>100_bases GCCGCGGGGCGTCAGATCCGGTCTTCGGTGGTAAGCGCCAGCGTCAGTCGCCGCAGCCATGGCGCCGCGAACAGCACGAC CGGCAGCATCAGCATCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGIRRISKHLFTSRGLVQKAFPPSALDAIERAIGASEARHAGQIRFVVEGALDGAPLFRDQPARERALDVFSQLRIWDTE HNNGVLIYLLLADRDVEIVADRGIDGRVDAAAWEDICREMESAFRQGRFEAGVLRGIELITAHLAAHFPKDSGGDNELPD APVVV
Sequences:
>Translated_165_residues MGIRRISKHLFTSRGLVQKAFPPSALDAIERAIGASEARHAGQIRFVVEGALDGAPLFRDQPARERALDVFSQLRIWDTE HNNGVLIYLLLADRDVEIVADRGIDGRVDAAAWEDICREMESAFRQGRFEAGVLRGIELITAHLAAHFPKDSGGDNELPD APVVV >Mature_164_residues GIRRISKHLFTSRGLVQKAFPPSALDAIERAIGASEARHAGQIRFVVEGALDGAPLFRDQPARERALDVFSQLRIWDTEH NNGVLIYLLLADRDVEIVADRGIDGRVDAAAWEDICREMESAFRQGRFEAGVLRGIELITAHLAAHFPKDSGGDNELPDA PVVV
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18166; Mature: 18035
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRRISKHLFTSRGLVQKAFPPSALDAIERAIGASEARHAGQIRFVVEGALDGAPLFRD CCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCCCCC QPARERALDVFSQLRIWDTEHNNGVLIYLLLADRDVEIVADRGIDGRVDAAAWEDICREM CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHH ESAFRQGRFEAGVLRGIELITAHLAAHFPKDSGGDNELPDAPVVV HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GIRRISKHLFTSRGLVQKAFPPSALDAIERAIGASEARHAGQIRFVVEGALDGAPLFRD CHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCCCCC QPARERALDVFSQLRIWDTEHNNGVLIYLLLADRDVEIVADRGIDGRVDAAAWEDICREM CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHH ESAFRQGRFEAGVLRGIELITAHLAAHFPKDSGGDNELPDAPVVV HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA