Click here to switch to the map view.

The map label for this gene is 86751060

Identifier: 86751060

GI number: 86751060

Start: 4512319

End: 4512759

Strand: Reverse

Name: 86751060

Synonym: RPB_3952

Alternate gene names: NA

Gene position: 4512759-4512319 (Counterclockwise)

Preceding gene: 86751062

Following gene: 86751059

Centisome position: 84.64

GC content: 69.61

Gene sequence:

>441_bases
ATGAAAAGAGACAGCCGCCTGTCGTCGGTTCTGCATGCGCTGCTGCACATGGCGGAGCACGACGCACCGATGACCTCCGA
CCAGCTCGCCGCGTGCATGTGCACCCATCCGGTGGTGGTGCGGCGGACGATGGGACTGCTGCGCGAGGCCGGGCTGGTGG
CGTCCGAGCGCGGGCCGTCCGGCGGCTGGCTGATCACCGCCGATCCCGCCGCCGTCACGCTGCGCGACTTGCACCAGGCG
CTCGGCGAGCCGGCGATCTTCGCGATCGGCAATCGCAACGAGACGCCGGAGTGTCTGGTCGAGCAGGTCGTCAACGCCGC
GCTCGACAGCGCCTTCGTCGACGCCGAGGCGCTGCTGCTCGAACGCTTCGCCGAGGTGACGCTGGCGAAGCTGTCGGCGG
ATTTCAACCGGCGCCACGCGGCGCAGCGCGCCCGAAAATAA

Upstream 100 bases:

>100_bases
GCGAATGGATCGAATTCAAGCAAACCTCGTGCCGTTTCCCCAGAGATCAGCCGGATCATCCGGCTTGCGTTGGCGCTCTA
TTCGTAATAATTGAAGTTAC

Downstream 100 bases:

>100_bases
AGGATTGATCGACATGCAGCACGACGTGATCGTGATCGGCGGCAGCTATGCGGGCATGGCCGCAGCACTCCAGCTGCTGC
GCGCCCGCCGCAGCGTGCTG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Transcriptional Regulator Rrf2 Family; Transcriptional Regulator Badm/Rrf2 Family; Rrf2 Family Transcriptional Regulator; Transcriptional Regulator Family; Superfamily; Transcriptional Regulator Rrf2 Family Protein; Transcriptional Regulator Superfamily; HTH Domain-Containing; Transcription Regulator Protein; HTH-Type Transcriptional Regulator YwnA; Rf2 Family Transcriptional Regulator; Transcriptional Regulator Family Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKRDSRLSSVLHALLHMAEHDAPMTSDQLAACMCTHPVVVRRTMGLLREAGLVASERGPSGGWLITADPAAVTLRDLHQA
LGEPAIFAIGNRNETPECLVEQVVNAALDSAFVDAEALLLERFAEVTLAKLSADFNRRHAAQRARK

Sequences:

>Translated_146_residues
MKRDSRLSSVLHALLHMAEHDAPMTSDQLAACMCTHPVVVRRTMGLLREAGLVASERGPSGGWLITADPAAVTLRDLHQA
LGEPAIFAIGNRNETPECLVEQVVNAALDSAFVDAEALLLERFAEVTLAKLSADFNRRHAAQRARK
>Mature_146_residues
MKRDSRLSSVLHALLHMAEHDAPMTSDQLAACMCTHPVVVRRTMGLLREAGLVASERGPSGGWLITADPAAVTLRDLHQA
LGEPAIFAIGNRNETPECLVEQVVNAALDSAFVDAEALLLERFAEVTLAKLSADFNRRHAAQRARK

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15849; Mature: 15849

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDSRLSSVLHALLHMAEHDAPMTSDQLAACMCTHPVVVRRTMGLLREAGLVASERGPS
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
GGWLITADPAAVTLRDLHQALGEPAIFAIGNRNETPECLVEQVVNAALDSAFVDAEALLL
CCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERFAEVTLAKLSADFNRRHAAQRARK
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRDSRLSSVLHALLHMAEHDAPMTSDQLAACMCTHPVVVRRTMGLLREAGLVASERGPS
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
GGWLITADPAAVTLRDLHQALGEPAIFAIGNRNETPECLVEQVVNAALDSAFVDAEALLL
CCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERFAEVTLAKLSADFNRRHAAQRARK
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA