Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86751018
Identifier: 86751018
GI number: 86751018
Start: 4462930
End: 4463355
Strand: Reverse
Name: 86751018
Synonym: RPB_3910
Alternate gene names: NA
Gene position: 4463355-4462930 (Counterclockwise)
Preceding gene: 86751019
Following gene: 86751017
Centisome position: 83.71
GC content: 65.96
Gene sequence:
>426_bases ATGAAGTCACGTGACACGCTGATCCGCTTGAAGAAGTTTCAGGTCGACGAGCGGCGCAGGCGGGTGGCCCAGATCGAGGG GATGATCGCGGACTTCCAGCGGATGTCGAACGATCTGGAGCGCGAAATCCAGACCGAGCAGGACCGCGCCGGCATCACCG ATCCCACCCACTTCGCCTATCCGACCTATGCCAAGGCCGCGATCCAGCGCCGCGAGAATCTCACCCGCTCGGCCGACGAA TTGCGGGTTCAGCTCGAGGACGCGCGCGCGCAATTGTCCGAGGCGTTCGACGAGTTGAAGAAGGTCGAGCTGCTCGACGA GCGCGATCAGGCCCGCGAGCGCGCCGAGGAAAGCGCGCGCGAACAGGCCGACCTCGACAGCATCGGGCTGATGCGGTCGC GCCTCGGCGCCGTTGCCTCGGCCTGA
Upstream 100 bases:
>100_bases GCGTCATCATGCTTGGCACGTCAATCGTTTTGCCGGTTGGCCCCTTGCGGGAGACCGGCCTGTCCCGCGTCGAATCGGGA CTTCTGGGGAGTAAGAGTCG
Downstream 100 bases:
>100_bases CCGACCTCTGCCTTGCCGATTCCGACAAGCCCGGGCGCCCGCGCCCGGGCTTTTGCCGTGCTGTATCCACAGCAGAGACC GCTGCGACATGGCGGACCGA
Product: flagellar export FliJ
Products: NA
Alternate protein names: Flagellar Export FliJ; Flagelar FliJ Protein
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKSRDTLIRLKKFQVDERRRRVAQIEGMIADFQRMSNDLEREIQTEQDRAGITDPTHFAYPTYAKAAIQRRENLTRSADE LRVQLEDARAQLSEAFDELKKVELLDERDQARERAEESAREQADLDSIGLMRSRLGAVASA
Sequences:
>Translated_141_residues MKSRDTLIRLKKFQVDERRRRVAQIEGMIADFQRMSNDLEREIQTEQDRAGITDPTHFAYPTYAKAAIQRRENLTRSADE LRVQLEDARAQLSEAFDELKKVELLDERDQARERAEESAREQADLDSIGLMRSRLGAVASA >Mature_141_residues MKSRDTLIRLKKFQVDERRRRVAQIEGMIADFQRMSNDLEREIQTEQDRAGITDPTHFAYPTYAKAAIQRRENLTRSADE LRVQLEDARAQLSEAFDELKKVELLDERDQARERAEESAREQADLDSIGLMRSRLGAVASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16323; Mature: 16323
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRDTLIRLKKFQVDERRRRVAQIEGMIADFQRMSNDLEREIQTEQDRAGITDPTHFAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PTYAKAAIQRRENLTRSADELRVQLEDARAQLSEAFDELKKVELLDERDQARERAEESAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQADLDSIGLMRSRLGAVASA HHHCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSRDTLIRLKKFQVDERRRRVAQIEGMIADFQRMSNDLEREIQTEQDRAGITDPTHFAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PTYAKAAIQRRENLTRSADELRVQLEDARAQLSEAFDELKKVELLDERDQARERAEESAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQADLDSIGLMRSRLGAVASA HHHCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA