Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86751011
Identifier: 86751011
GI number: 86751011
Start: 4455977
End: 4456405
Strand: Reverse
Name: 86751011
Synonym: RPB_3903
Alternate gene names: NA
Gene position: 4456405-4455977 (Counterclockwise)
Preceding gene: 86751012
Following gene: 86751001
Centisome position: 83.58
GC content: 59.91
Gene sequence:
>429_bases ATGAGAGCCGGTGACTACGTCCGGTGCAATTTTCCCTTCAGGGAGGTGGCCGGCCCCGGCCCATCGGCTCACATCGTCAT CTGTATCGGCACCGGTCGAGTTGCGGATCGAGCCTATGCGGTGGTTGTCTATACGAGCAGCCGTGTTTCCTTTGAGGGTT CAAGGCGGCCGCGTCAGCAGCTCTATGTCGATCAACCGCAGGCGGGTTTGCTCGGACAGAAAAAGCCGTTCGTCATTGAT GCGAGCCGGGTCGCCCGTTTGCCGATCAATCGCGACTATTTTCCAGATCTGCGCGACGGCAGTGTGCCGACACGTGGCCA AGATCCACGCTGCGCGCGAGCCGTCGTCGATCGTATTCGCGATCTGATAGCGGAGGGATTTGTGGTTGTGCCTGTCGATT TGACGACGCCGCCCAAGTCGAGTGGCTGA
Upstream 100 bases:
>100_bases TCGGCCAGGATCCGGATTCGTTCTTGACCGCGACAGCGATGAGAGCGACGACGACTATCAGGCGCGTTCTTCGACGCTCG ACCGTCTCTTCCCCTGAGCC
Downstream 100 bases:
>100_bases GAGCTGACATCGCTATCGCGGAGTGAGACGAGGGGGCGTGCGCTGCCCTCACCCCTTCGCCTGCCCCGCCAGTTCTTTCC TGACCGCGGCGGCCGAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQLYVDQPQAGLLGQKKPFVID ASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIRDLIAEGFVVVPVDLTTPPKSSG
Sequences:
>Translated_142_residues MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQLYVDQPQAGLLGQKKPFVID ASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIRDLIAEGFVVVPVDLTTPPKSSG >Mature_142_residues MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQLYVDQPQAGLLGQKKPFVID ASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIRDLIAEGFVVVPVDLTTPPKSSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15599; Mature: 15599
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQ CCCCCEEEECCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEECCEEEECCCCCCCCC LYVDQPQAGLLGQKKPFVIDASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIR EEECCCCCCCCCCCCCEEEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH DLIAEGFVVVPVDLTTPPKSSG HHHHCCEEEEEEECCCCCCCCC >Mature Secondary Structure MRAGDYVRCNFPFREVAGPGPSAHIVICIGTGRVADRAYAVVVYTSSRVSFEGSRRPRQQ CCCCCEEEECCCHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEECCEEEECCCCCCCCC LYVDQPQAGLLGQKKPFVIDASRVARLPINRDYFPDLRDGSVPTRGQDPRCARAVVDRIR EEECCCCCCCCCCCCCEEEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH DLIAEGFVVVPVDLTTPPKSSG HHHHCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA